FFCP PHASE1:Hg19::chr14:106743413..106743450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106743413..106743450,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr14:106743413..106743450,- | |description=CAGE_peak_at_chr14:106743413..106743450,- | ||
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|ontology_enrichment_celltype=CL:0000945!1.72e-12!24;CL:0000826!1.72e-12!24;CL:0002127!4.06e-10!1;CL:0000914!4.06e-10!1;CL:0000911!4.06e-10!1;CL:0000814!4.06e-10!1;CL:0002042!4.06e-10!1;CL:0002039!4.06e-10!1;CL:0002040!4.06e-10!1;CL:0002041!4.06e-10!1;CL:0000946!7.55e-10!1;CL:0000786!7.55e-10!1;CL:0000980!7.55e-10!1;CL:0000838!2.14e-07!52;CL:0000542!3.05e-07!53;CL:0000051!3.05e-07!53;CL:0000080!9.97e-07!6 | |ontology_enrichment_celltype=CL:0000945!1.72e-12!24;CL:0000826!1.72e-12!24;CL:0002127!4.06e-10!1;CL:0000914!4.06e-10!1;CL:0000911!4.06e-10!1;CL:0000814!4.06e-10!1;CL:0002042!4.06e-10!1;CL:0002039!4.06e-10!1;CL:0002040!4.06e-10!1;CL:0002041!4.06e-10!1;CL:0000946!7.55e-10!1;CL:0000786!7.55e-10!1;CL:0000980!7.55e-10!1;CL:0000838!2.14e-07!52;CL:0000542!3.05e-07!53;CL:0000051!3.05e-07!53;CL:0000080!9.97e-07!6 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!UBERON:0007123;2.97e-09;5 | |ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!UBERON:0007123;2.97e-09;5 | ||
|ontology_enrichment_disease=DOID:2355!2.37e-10!1;DOID:0060058!1.91e-08!10 | |ontology_enrichment_disease=DOID:2355!2.37e-10!1;DOID:0060058!1.91e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.70e-40;1!DOID:74;6.30e-21;2!DOID:1287;3.60e-11;4 | |ontology_enrichment_disease_v019=DOID:2355;2.70e-40;1!DOID:74;6.30e-21;2!DOID:1287;3.60e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:74,6.96e-21,2;DOID:1287,3.79e-11,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0002046;2.97e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0002046;2.97e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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|short_description=p@chr14:106743413..106743450,- | |short_description=p@chr14:106743413..106743450,- | ||
}} | }} |
Latest revision as of 18:45, 24 July 2015
Short description: | p@chr14:106743413..106743450, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106743413..106743450, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
hematopoietic system disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |