FFCP PHASE1:Hg19::chr14:106329578..106329585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106329578..106329585,- | |||
|coexpression_cluster_id=C116 | |coexpression_cluster_id=C116 | ||
|description=CAGE_peak_at_chr14:106329578..106329585,- | |description=CAGE_peak_at_chr14:106329578..106329585,- | ||
|id=chr14:106329578..106329585,- | |id=chr14:106329578..106329585,- | ||
|ontology_enrichment_celltype=CL:0000945!6.29e-65!24;CL:0000826!6.29e-65!24;CL:0000542!2.09e-31!53;CL:0000051!2.09e-31!53;CL:0000838!3.29e-28!52;CL:0000236!4.57e-16!14;CL:0002087!3.21e-15!119;CL:0000738!2.26e-12!140;CL:0002031!3.04e-11!124;CL:0000037!1.44e-10!172;CL:0000566!1.44e-10!172;CL:0002032!6.23e-10!165;CL:0000837!6.23e-10!165;CL:0000988!9.07e-10!182;CL:0000817!2.33e-09!3;CL:0000946!5.58e-08!1;CL:0000786!5.58e-08!1;CL:0000980!5.58e-08!1 | |ontology_enrichment_celltype=CL:0000945!6.29e-65!24;CL:0000826!6.29e-65!24;CL:0000542!2.09e-31!53;CL:0000051!2.09e-31!53;CL:0000838!3.29e-28!52;CL:0000236!4.57e-16!14;CL:0002087!3.21e-15!119;CL:0000738!2.26e-12!140;CL:0002031!3.04e-11!124;CL:0000037!1.44e-10!172;CL:0000566!1.44e-10!172;CL:0002032!6.23e-10!165;CL:0000837!6.23e-10!165;CL:0000988!9.07e-10!182;CL:0000817!2.33e-09!3;CL:0000946!5.58e-08!1;CL:0000786!5.58e-08!1;CL:0000980!5.58e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.08e-37;24!CL:0000946;6.72e-26;1!CL:0000786;6.72e-26;1!CL:0000236;1.42e-08;13!CL:0000542;3.01e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.08e-37,24;CL:0000826,4.08e-37,24;CL:0000946,5.93e-26,1;CL:0000786,5.93e-26,1;CL:0000980,5.93e-26,1;CL:0000838,2.82e-17,52;CL:0000542,5.92e-17,53;CL:0000051,5.92e-17,53;CL:0000236,1.33e-16,14;CL:0000785,1.07e-13,2;CL:0000955,1.07e-13,2;CL:0000818,1.07e-13,2;CL:0000954,1.07e-13,2;CL:0000816,1.07e-13,2;CL:0000817,1.41e-09,3;CL:0002087,8.65e-08,115;CL:0002031,1.82e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;1.14e-13;2!CL:0000051;3.01e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!7.99e-16!10;DOID:2531!1.30e-08!51;DOID:0060083!1.30e-08!51;DOID:4960!4.28e-08!1;DOID:0070004!4.28e-08!1;DOID:12603!7.26e-08!1;DOID:630!1.01e-07!1;DOID:0050177!1.01e-07!1;DOID:0050427!1.01e-07!1;DOID:2355!1.80e-07!1 | |ontology_enrichment_disease=DOID:0060058!7.99e-16!10;DOID:2531!1.30e-08!51;DOID:0060083!1.30e-08!51;DOID:4960!4.28e-08!1;DOID:0070004!4.28e-08!1;DOID:12603!7.26e-08!1;DOID:630!1.01e-07!1;DOID:0050177!1.01e-07!1;DOID:0050427!1.01e-07!1;DOID:2355!1.80e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;2.15e-26;1!DOID:0070004;2.15e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.16e-26,1;DOID:0070004,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.12e-19!3;UBERON:0004854!3.12e-19!3;UBERON:0009034!3.12e-19!3;UBERON:0002095!3.12e-19!3;UBERON:0004782!3.12e-19!3;UBERON:0003281!3.12e-19!3;UBERON:0009664!3.12e-19!3;UBERON:0002296!3.12e-19!3;UBERON:0005602!3.12e-19!3;UBERON:0001179!3.12e-19!3;UBERON:0006293!3.12e-19!3;UBERON:0004177!1.52e-08!7;UBERON:0002372!9.44e-08!1;UBERON:0001961!9.44e-08!1;UBERON:0001744!9.44e-08!1;UBERON:0001735!9.44e-08!1;UBERON:0001154!1.22e-07!1;UBERON:0001153!1.22e-07!1;UBERON:0000029!1.48e-07!1;UBERON:0000945!1.57e-07!8;UBERON:0010039!1.57e-07!8;UBERON:0001736!1.69e-07!1;UBERON:0006298!1.69e-07!1 | |ontology_enrichment_uberon=UBERON:0002106!3.12e-19!3;UBERON:0004854!3.12e-19!3;UBERON:0009034!3.12e-19!3;UBERON:0002095!3.12e-19!3;UBERON:0004782!3.12e-19!3;UBERON:0003281!3.12e-19!3;UBERON:0009664!3.12e-19!3;UBERON:0002296!3.12e-19!3;UBERON:0005602!3.12e-19!3;UBERON:0001179!3.12e-19!3;UBERON:0006293!3.12e-19!3;UBERON:0004177!1.52e-08!7;UBERON:0002372!9.44e-08!1;UBERON:0001961!9.44e-08!1;UBERON:0001744!9.44e-08!1;UBERON:0001735!9.44e-08!1;UBERON:0001154!1.22e-07!1;UBERON:0001153!1.22e-07!1;UBERON:0000029!1.48e-07!1;UBERON:0000945!1.57e-07!8;UBERON:0010039!1.57e-07!8;UBERON:0001736!1.69e-07!1;UBERON:0006298!1.69e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.30e-09,3;UBERON:0004854,1.30e-09,3;UBERON:0009034,1.30e-09,3;UBERON:0002095,1.30e-09,3;UBERON:0004782,1.30e-09,3;UBERON:0003281,1.30e-09,3;UBERON:0009664,1.30e-09,3;UBERON:0002296,1.30e-09,3;UBERON:0005602,1.30e-09,3;UBERON:0001179,1.30e-09,3;UBERON:0006293,1.30e-09,3 | |||
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|short_description=p@chr14:106329578..106329585,- | |short_description=p@chr14:106329578..106329585,- | ||
}} | }} |
Latest revision as of 18:42, 24 July 2015
Short description: | p@chr14:106329578..106329585, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106329578..106329585, - |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.08e-37 | 24 |
pro-B cell | 4.08e-37 | 24 |
antibody secreting cell | 5.93e-26 | 1 |
plasma cell | 5.93e-26 | 1 |
plasmablast | 5.93e-26 | 1 |
lymphoid lineage restricted progenitor cell | 2.82e-17 | 52 |
lymphocyte | 5.92e-17 | 53 |
common lymphoid progenitor | 5.92e-17 | 53 |
B cell | 1.33e-16 | 14 |
mature B cell | 1.07e-13 | 2 |
pre-B-II cell | 1.07e-13 | 2 |
transitional stage B cell | 1.07e-13 | 2 |
small pre-B-II cell | 1.07e-13 | 2 |
immature B cell | 1.07e-13 | 2 |
precursor B cell | 1.41e-09 | 3 |
nongranular leukocyte | 8.65e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.82e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.30e-09 | 3 |
gastrointestinal system mesentery | 1.30e-09 | 3 |
stomach region | 1.30e-09 | 3 |
mesentery | 1.30e-09 | 3 |
gastrointestinal system serosa | 1.30e-09 | 3 |
mesentery of stomach | 1.30e-09 | 3 |
gut mesentery | 1.30e-09 | 3 |
dorsal mesentery | 1.30e-09 | 3 |
dorsal mesogastrium | 1.30e-09 | 3 |
peritoneal cavity | 1.30e-09 | 3 |
spleen primordium | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.16e-26 | 1 |
myeloma | 2.16e-26 | 1 |