FFCP PHASE1:Hg19::chr14:106321136..106321178,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:106321136..106321178,+ | |||
|coexpression_cluster_id=C350 | |coexpression_cluster_id=C350 | ||
|description=CAGE_peak_at_chr14:106321136..106321178,+ | |description=CAGE_peak_at_chr14:106321136..106321178,+ | ||
|id=chr14:106321136..106321178,+ | |id=chr14:106321136..106321178,+ | ||
|ontology_enrichment_celltype=CL:0000945;1.40e-91;24!CL:0000236;2.65e-56;13!CL:0000542;9.89e-29;53!CL:0000817;2.24e-07;1 | |ontology_enrichment_celltype=CL:0000945!3.33e-49!24;CL:0000826!3.33e-49!24;CL:0000236!1.19e-27!14;CL:0000542!4.93e-23!53;CL:0000051!4.93e-23!53;CL:0000838!2.86e-21!52;CL:0002087!4.82e-11!119;CL:0000738!2.36e-08!140;CL:0000842!2.52e-08!3;CL:0000037!3.53e-08!172;CL:0000566!3.53e-08!172;CL:0000988!2.55e-07!182;CL:0002031!6.36e-07!124;CL:0002032!9.23e-07!165;CL:0000837!9.23e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000945;1.40e-91;24!CL:0000236;2.65e-56;13!CL:0000542;9.89e-29;53!CL:0000817;2.24e-07;1 | ||
|ontology_enrichment_disease=DOID:12603;4.28e-08;1!DOID:4960;2.24e-07;1!DOID:0070004;2.24e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000945,7.29e-92,24;CL:0000826,7.29e-92,24;CL:0000236,2.39e-52,14;CL:0000542,3.95e-44,53;CL:0000051,3.95e-44,53;CL:0000838,2.48e-40,52;CL:0002087,6.22e-18,115;CL:0002031,4.25e-15,120;CL:0000738,1.50e-14,136;CL:0002032,4.72e-13,161;CL:0000837,4.72e-13,161;CL:0000037,2.47e-12,168;CL:0000988,1.71e-11,177 | ||
|ontology_enrichment_uberon=UBERON:0002106;2.70e-09;3!UBERON:0000029;5.58e-08;1!UBERON:0002390;2.19e-07;32!UBERON:0002363;2.24e-07;1 | |ontology_enrichment_development_v019=CL:0000051;9.89e-29;53!UBERON:0004872;1.65e-08;7!UBERON:0010115;2.24e-07;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;4.28e-08;1!DOID:4960;2.24e-07;1!DOID:0070004;2.24e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.28e-08,1;DOID:4960,2.04e-07,1;DOID:0070004,2.04e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.45e-13!15;UBERON:0000179!3.45e-13!15;UBERON:0000463!3.45e-13!15;UBERON:0007023!1.76e-12!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.70e-09;3!UBERON:0000029;5.58e-08;1!UBERON:0002390;2.19e-07;32!UBERON:0002363;2.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.33e-09,3;UBERON:0004854,2.33e-09,3;UBERON:0009034,2.33e-09,3;UBERON:0002095,2.33e-09,3;UBERON:0004782,2.33e-09,3;UBERON:0003281,2.33e-09,3;UBERON:0009664,2.33e-09,3;UBERON:0002296,2.33e-09,3;UBERON:0005602,2.33e-09,3;UBERON:0001179,2.33e-09,3;UBERON:0006293,2.33e-09,3;UBERON:0000029,5.58e-08,1;UBERON:0002363,3.17e-07,1;UBERON:0007645,3.17e-07,1;UBERON:0007647,3.17e-07,1;UBERON:0010115,3.17e-07,1;UBERON:0000178,9.87e-07,15;UBERON:0000179,9.87e-07,15;UBERON:0000463,9.87e-07,15 | |||
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| ||
|short_description=p@chr14:106321136..106321178,+ | |short_description=p@chr14:106321136..106321178,+ | ||
}} | }} |
Latest revision as of 18:40, 24 July 2015
Short description: | p@chr14:106321136..106321178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106321136..106321178, + |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.29e-92 | 24 |
pro-B cell | 7.29e-92 | 24 |
B cell | 2.39e-52 | 14 |
lymphocyte | 3.95e-44 | 53 |
common lymphoid progenitor | 3.95e-44 | 53 |
lymphoid lineage restricted progenitor cell | 2.48e-40 | 52 |
nongranular leukocyte | 6.22e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 4.25e-15 | 120 |
leukocyte | 1.50e-14 | 136 |
hematopoietic oligopotent progenitor cell | 4.72e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.72e-13 | 161 |
hematopoietic stem cell | 2.47e-12 | 168 |
hematopoietic cell | 1.71e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.33e-09 | 3 |
gastrointestinal system mesentery | 2.33e-09 | 3 |
stomach region | 2.33e-09 | 3 |
mesentery | 2.33e-09 | 3 |
gastrointestinal system serosa | 2.33e-09 | 3 |
mesentery of stomach | 2.33e-09 | 3 |
gut mesentery | 2.33e-09 | 3 |
dorsal mesentery | 2.33e-09 | 3 |
dorsal mesogastrium | 2.33e-09 | 3 |
peritoneal cavity | 2.33e-09 | 3 |
spleen primordium | 2.33e-09 | 3 |
lymph node | 5.58e-08 | 1 |
dura mater | 3.17e-07 | 1 |
future meninx | 3.17e-07 | 1 |
ectomeninx | 3.17e-07 | 1 |
future dura mater | 3.17e-07 | 1 |
blood | 9.87e-07 | 15 |
haemolymphatic fluid | 9.87e-07 | 15 |
organism substance | 9.87e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.28e-08 | 1 |
bone marrow cancer | 2.04e-07 | 1 |
myeloma | 2.04e-07 | 1 |