FFCP PHASE1:Hg19::chr14:106209338..106209364,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:106209338..106209364,+
|short_description=p@chr14:106209338..106209364,+
|description=CAGE_peak_at_chr14:106209338..106209364,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:106209338..106209364,+ | |||
|coexpression_cluster_id=C481 | |||
|description=CAGE_peak_at_chr14:106209338..106209364,+ | |||
|id=chr14:106209338..106209364,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.29e-14!24;CL:0000826!4.29e-14!24;CL:0000236!1.21e-11!14;CL:0002619!8.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.97e-14;1!CL:0000786;1.97e-14;1!CL:0000945;5.32e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,3.15e-14,1;CL:0000786,3.15e-14,1;CL:0000980,3.15e-14,1;CL:0000945,4.88e-09,24;CL:0000826,4.88e-09,24;CL:0000236,4.95e-09,14;CL:0000785,9.19e-08,2;CL:0000955,9.19e-08,2;CL:0000818,9.19e-08,2;CL:0000954,9.19e-08,2;CL:0000816,9.19e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.74e-15;1!UBERON:0004872;1.15e-08;7!UBERON:0006965;4.09e-08;2!CL:0000954;7.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.97e-14;1!DOID:0050177;1.97e-14;1!DOID:0050427;1.97e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.41e-14,1;DOID:0050177,1.41e-14,1;DOID:0050427,1.41e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.72e-27!115;UBERON:0001829!3.86e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.72e-15;1!UBERON:0002372;5.42e-15;1!UBERON:0001961;5.42e-15;1!UBERON:0001744;5.42e-15;1!UBERON:0001042;5.42e-15;1!UBERON:0001735;5.42e-15;1!UBERON:0006562;3.82e-08;2!UBERON:0001255;4.85e-08;2!UBERON:0001556;4.85e-08;2!UBERON:0003127;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.73e-15,1;UBERON:0002372,5.42e-15,1;UBERON:0001961,5.42e-15,1;UBERON:0001744,5.42e-15,1;UBERON:0001735,5.42e-15,1;UBERON:0007023,1.49e-08,114;UBERON:0001255,5.37e-08,2;UBERON:0001556,5.37e-08,2;UBERON:0003127,8.04e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0.800791974072025,0.574752439954483,1.98313461835459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23155749661011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61870344518732,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60181118851542,0,0.414239055347196,14.3888146325466,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,2.34959794949634,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0.639701945702943,0,0.258355639344024,0,0,0.190941474834495,0,0.217716747896961,0,5.388164241167,1.14755528628282,0,0,0,0,0,0,0,0,0,3.01910690386539,1.9234109538194 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0.800791974072025,0.574752439954483,1.98313461835459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23155749661011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61870344518732,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60181118851542,0,0.414239055347196,14.3888146325466,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,2.34959794949634,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0.639701945702943,0,0.258355639344024,0,0,0.190941474834495,0,0.217716747896961,0,5.388164241167,1.14755528628282,0,0,0,0,0,0,0,0,0,3.01910690386539,1.9234109538194 | ||
|short_description=p@chr14:106209338..106209364,+ | |||
}} | }} |
Latest revision as of 18:39, 24 July 2015
Short description: | p@chr14:106209338..106209364, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106209338..106209364, + |
Coexpression cluster: | C481_lymph_vein_tonsil_appendix_submaxillary_trachea_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 3.15e-14 | 1 |
plasma cell | 3.15e-14 | 1 |
plasmablast | 3.15e-14 | 1 |
lymphocyte of B lineage | 4.88e-09 | 24 |
pro-B cell | 4.88e-09 | 24 |
B cell | 4.95e-09 | 14 |
mature B cell | 9.19e-08 | 2 |
pre-B-II cell | 9.19e-08 | 2 |
transitional stage B cell | 9.19e-08 | 2 |
small pre-B-II cell | 9.19e-08 | 2 |
immature B cell | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.73e-15 | 1 |
tonsil | 5.42e-15 | 1 |
mucosa-associated lymphoid tissue | 5.42e-15 | 1 |
lymphoid tissue | 5.42e-15 | 1 |
tonsillar ring | 5.42e-15 | 1 |
adult organism | 1.49e-08 | 114 |
urinary bladder | 5.37e-08 | 2 |
lower urinary tract | 5.37e-08 | 2 |
open tracheal system trachea | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.41e-14 | 1 |
monogenic disease | 1.41e-14 | 1 |
xeroderma pigmentosum | 1.41e-14 | 1 |