FFCP PHASE1:Hg19::chr14:106174826..106174853,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:106174826..106174853,+
|short_description=p@chr14:106174826..106174853,+
|description=CAGE_peak_at_chr14:106174826..106174853,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:106174826..106174853,+ | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_at_chr14:106174826..106174853,+ | |||
|id=chr14:106174826..106174853,+ | |||
|ontology_enrichment_celltype=CL:0000236!1.15e-24!14;CL:0000945!1.06e-13!24;CL:0000826!1.06e-13!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.50e-22;13!CL:0000945;4.30e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.06e-20,14;CL:0000945,4.51e-12,24;CL:0000826,4.51e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.93e-13;1!UBERON:0008801;8.14e-13;1!UBERON:0004872;1.40e-07;7!UBERON:0006595;1.64e-07;86!UBERON:0006965;4.83e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.66e-37!115;UBERON:0001829!1.85e-10!2;UBERON:0001044!1.58e-07!6;UBERON:0003293!1.58e-07!6;UBERON:0003294!1.58e-07!6;UBERON:0010047!1.58e-07!6;UBERON:0000167!1.58e-07!6;UBERON:0003408!2.31e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.84e-24;2!UBERON:0001736;1.93e-13;1!UBERON:0002171;1.93e-13;1!UBERON:0006518;1.93e-13;1!UBERON:0008949;1.93e-13;1!UBERON:0000101;1.93e-13;1!UBERON:0002167;1.93e-13;1!UBERON:0002372;3.75e-13;1!UBERON:0001961;3.75e-13;1!UBERON:0001744;3.75e-13;1!UBERON:0001042;3.75e-13;1!UBERON:0001735;3.75e-13;1!UBERON:0001831;8.14e-13;1!UBERON:0001567;8.14e-13;1!UBERON:0004921;8.36e-11;33!UBERON:0001044;8.57e-09;6!UBERON:0003293;8.57e-09;6!UBERON:0003294;8.57e-09;6!UBERON:0010047;8.57e-09;6!UBERON:0003408;8.57e-09;6!UBERON:0000167;8.57e-09;6!UBERON:0006562;3.28e-07;2!UBERON:0003127;4.83e-07;2!UBERON:0000341;4.83e-07;2!UBERON:0004089;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.85e-24,2;UBERON:0001736,1.61e-13,1;UBERON:0006298,1.61e-13,1;UBERON:0002171,1.82e-13,1;UBERON:0006518,1.82e-13,1;UBERON:0008949,1.82e-13,1;UBERON:0000101,1.82e-13,1;UBERON:0002167,1.82e-13,1;UBERON:0007023,2.93e-13,114;UBERON:0002372,3.76e-13,1;UBERON:0001961,3.76e-13,1;UBERON:0001744,3.76e-13,1;UBERON:0001735,3.76e-13,1;UBERON:0001831,9.73e-13,1;UBERON:0001567,9.73e-13,1;UBERON:0008801,9.73e-13,1;UBERON:0001044,8.57e-09,6;UBERON:0003293,8.57e-09,6;UBERON:0003294,8.57e-09,6;UBERON:0010047,8.57e-09,6;UBERON:0000167,8.57e-09,6;UBERON:0005409,1.36e-07,25;UBERON:0000341,4.42e-07,2;UBERON:0004089,5.28e-07,2;UBERON:0003127,5.60e-07,2;UBERON:0004921,5.83e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,2.66852776159066,2.13365111283254,0,0.574752439954483,0.661044872784862,2.86216126360609,0,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,3.18447232212021,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0,3.31391244277756,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08696632431779,0,0,0,0,0,0,0,0,2.81951753939561,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.91910583710883,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,2.6940821205835,1.36272190246085,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,2.66852776159066,2.13365111283254,0,0.574752439954483,0.661044872784862,2.86216126360609,0,1.76171156811282,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,3.18447232212021,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.533937062838473,0,3.31391244277756,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08696632431779,0,0,0,0,0,0,0,0,2.81951753939561,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.91910583710883,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,2.6940821205835,1.36272190246085,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr14:106174826..106174853,+ | |||
}} | }} |
Latest revision as of 18:38, 24 July 2015
Short description: | p@chr14:106174826..106174853, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:106174826..106174853, + |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.06e-20 | 14 |
lymphocyte of B lineage | 4.51e-12 | 24 |
pro-B cell | 4.51e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.85e-24 | 2 |
submandibular gland | 1.61e-13 | 1 |
submandibular gland primordium | 1.61e-13 | 1 |
lower lobe of right lung | 1.82e-13 | 1 |
right lung lobe | 1.82e-13 | 1 |
lower lobe of lung | 1.82e-13 | 1 |
lobe of lung | 1.82e-13 | 1 |
right lung | 1.82e-13 | 1 |
adult organism | 2.93e-13 | 114 |
tonsil | 3.76e-13 | 1 |
mucosa-associated lymphoid tissue | 3.76e-13 | 1 |
lymphoid tissue | 3.76e-13 | 1 |
tonsillar ring | 3.76e-13 | 1 |
parotid gland | 9.73e-13 | 1 |
cheek | 9.73e-13 | 1 |
parotid gland primordium | 9.73e-13 | 1 |
saliva-secreting gland | 8.57e-09 | 6 |
gland of oral region | 8.57e-09 | 6 |
gland of foregut | 8.57e-09 | 6 |
oral gland | 8.57e-09 | 6 |
oral cavity | 8.57e-09 | 6 |
gastrointestinal system | 1.36e-07 | 25 |
throat | 4.42e-07 | 2 |
midface | 5.28e-07 | 2 |
open tracheal system trachea | 5.60e-07 | 2 |
subdivision of digestive tract | 5.83e-07 | 118 |