FFCP PHASE1:Hg19::chr14:106174726..106174747,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:106174726..106174747,-
|short_description=p4@BC113815
|description=CAGE_peak_4_at_BC113815_5end
|association_with_transcript=228bp_to_BC113815_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_BC113815_5end | |||
|cluster_id=chr14:106174726..106174747,- | |||
|coexpression_cluster_id=C394 | |||
|description=CAGE_peak_4_at_BC113815_5end | |||
|id=chr14:106174726..106174747,- | |||
|ontology_enrichment_celltype=CL:0000236!1.29e-22!14;CL:0000945!2.55e-12!24;CL:0000826!2.55e-12!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.22e-32;13!CL:0000945;8.61e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.61e-29,14;CL:0000945,8.62e-17,24;CL:0000826,8.62e-17,24;CL:0000838,3.59e-07,52;CL:0000542,5.13e-07,53;CL:0000051,5.13e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.52e-14;2!UBERON:0004872;2.02e-09;7!UBERON:0006298;1.05e-08;1!UBERON:0001045;1.22e-08;1!UBERON:0006242;1.88e-08;1!UBERON:0006595;1.93e-08;86!UBERON:0009143;3.83e-08;1!UBERON:0008801;3.83e-08;1!UBERON:0004874;5.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-44!115;UBERON:0001829!2.50e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.88e-15;2!UBERON:0004921;8.24e-14;33!UBERON:0001044;3.37e-11;6!UBERON:0003293;3.37e-11;6!UBERON:0003294;3.37e-11;6!UBERON:0010047;3.37e-11;6!UBERON:0003408;3.37e-11;6!UBERON:0000167;3.37e-11;6!UBERON:0001736;1.05e-08;1!UBERON:0001154;1.22e-08;1!UBERON:0001153;1.22e-08;1!UBERON:0009854;1.22e-08;1!UBERON:0002171;1.41e-08;1!UBERON:0006518;1.41e-08;1!UBERON:0008949;1.41e-08;1!UBERON:0000101;1.41e-08;1!UBERON:0002167;1.41e-08;1!UBERON:0002372;1.88e-08;1!UBERON:0001961;1.88e-08;1!UBERON:0001744;1.88e-08;1!UBERON:0001042;1.88e-08;1!UBERON:0001735;1.88e-08;1!UBERON:0001041;3.43e-08;14!UBERON:0001831;3.83e-08;1!UBERON:0001567;3.83e-08;1!UBERON:0000989;5.82e-08;1!UBERON:0008811;5.82e-08;1!UBERON:0001155;8.10e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.88e-21,114;UBERON:0001829,4.16e-15,2;UBERON:0001044,3.25e-11,6;UBERON:0003293,3.25e-11,6;UBERON:0003294,3.25e-11,6;UBERON:0010047,3.25e-11,6;UBERON:0000167,3.25e-11,6;UBERON:0001736,1.05e-08,1;UBERON:0006298,1.05e-08,1;UBERON:0001154,1.22e-08,1;UBERON:0001153,1.22e-08,1;UBERON:0001045,1.22e-08,1;UBERON:0002171,1.41e-08,1;UBERON:0006518,1.41e-08,1;UBERON:0008949,1.41e-08,1;UBERON:0000101,1.41e-08,1;UBERON:0002167,1.41e-08,1;UBERON:0002372,2.02e-08,1;UBERON:0001961,2.02e-08,1;UBERON:0001744,2.02e-08,1;UBERON:0001735,2.02e-08,1;UBERON:0001831,4.11e-08,1;UBERON:0001567,4.11e-08,1;UBERON:0008801,4.11e-08,1;UBERON:0000989,6.24e-08,1;UBERON:0008811,6.24e-08,1;UBERON:0006258,6.24e-08,1;UBERON:0005876,6.24e-08,1;UBERON:0004874,6.24e-08,1;UBERON:0001155,8.10e-08,9;UBERON:0004921,1.34e-07,118;UBERON:0003408,6.57e-07,10;UBERON:0001007,8.28e-07,145;UBERON:0001555,8.28e-07,145;UBERON:0007026,8.28e-07,145;UBERON:0005409,9.06e-07,25 | |||
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| ||
|short_description=p4@BC113815 | |||
}} | }} |
Latest revision as of 18:38, 24 July 2015
Short description: | p4@BC113815 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BC113815_5end |
Coexpression cluster: | C394_submaxillary_small_colon_throat_appendix_tonsil_trachea |
Association with transcript: | 228bp_to_BC113815_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.61e-29 | 14 |
lymphocyte of B lineage | 8.62e-17 | 24 |
pro-B cell | 8.62e-17 | 24 |
lymphoid lineage restricted progenitor cell | 3.59e-07 | 52 |
lymphocyte | 5.13e-07 | 53 |
common lymphoid progenitor | 5.13e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.88e-21 | 114 |
major salivary gland | 4.16e-15 | 2 |
saliva-secreting gland | 3.25e-11 | 6 |
gland of oral region | 3.25e-11 | 6 |
gland of foregut | 3.25e-11 | 6 |
oral gland | 3.25e-11 | 6 |
oral cavity | 3.25e-11 | 6 |
submandibular gland | 1.05e-08 | 1 |
submandibular gland primordium | 1.05e-08 | 1 |
vermiform appendix | 1.22e-08 | 1 |
caecum | 1.22e-08 | 1 |
midgut | 1.22e-08 | 1 |
lower lobe of right lung | 1.41e-08 | 1 |
right lung lobe | 1.41e-08 | 1 |
lower lobe of lung | 1.41e-08 | 1 |
lobe of lung | 1.41e-08 | 1 |
right lung | 1.41e-08 | 1 |
tonsil | 2.02e-08 | 1 |
mucosa-associated lymphoid tissue | 2.02e-08 | 1 |
lymphoid tissue | 2.02e-08 | 1 |
tonsillar ring | 2.02e-08 | 1 |
parotid gland | 4.11e-08 | 1 |
cheek | 4.11e-08 | 1 |
parotid gland primordium | 4.11e-08 | 1 |
penis | 6.24e-08 | 1 |
intromittent organ | 6.24e-08 | 1 |
lateral plate mesenchyme | 6.24e-08 | 1 |
undifferentiated genital tubercle | 6.24e-08 | 1 |
somatopleure | 6.24e-08 | 1 |
colon | 8.10e-08 | 9 |
subdivision of digestive tract | 1.34e-07 | 118 |
gland of gut | 6.57e-07 | 10 |
digestive system | 8.28e-07 | 145 |
digestive tract | 8.28e-07 | 145 |
primitive gut | 8.28e-07 | 145 |
gastrointestinal system | 9.06e-07 | 25 |