FFCP PHASE1:Hg19::chr13:80975508..80975547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:80975508..80975547,+ | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_at_chr13:80975508..80975547,+ | |description=CAGE_peak_at_chr13:80975508..80975547,+ | ||
|id=chr13:80975508..80975547,+ | |id=chr13:80975508..80975547,+ | ||
|ontology_enrichment_celltype=CL:0000945!6.73e-23!24;CL:0000826!6.73e-23!24;CL:0000236!1.06e-19!14;CL:0000542!2.32e-15!53;CL:0000051!2.32e-15!53;CL:0000838!1.08e-13!52;CL:0002087!8.66e-08!119;CL:0002031!3.45e-07!124 | |ontology_enrichment_celltype=CL:0000945!6.73e-23!24;CL:0000826!6.73e-23!24;CL:0000236!1.06e-19!14;CL:0000542!2.32e-15!53;CL:0000051!2.32e-15!53;CL:0000838!1.08e-13!52;CL:0002087!8.66e-08!119;CL:0002031!3.45e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.01e-43;24!CL:0000236;1.35e-31;13!CL:0000785;4.44e-18;1!CL:0000819;4.44e-18;1!CL:0000542;2.30e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.12e-43,24;CL:0000826,2.12e-43,24;CL:0000236,2.48e-29,14;CL:0000542,1.19e-24,53;CL:0000051,1.19e-24,53;CL:0000838,8.01e-20,52;CL:0000819,4.44e-18,1;CL:0002087,6.62e-11,115;CL:0000785,1.03e-09,2;CL:0000955,1.03e-09,2;CL:0000818,1.03e-09,2;CL:0000954,1.03e-09,2;CL:0000816,1.03e-09,2;CL:0000738,4.07e-09,136;CL:0002031,3.41e-08,120;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0000037,3.09e-07,168;CL:0000817,6.88e-07,3;CL:0000988,7.92e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.12e-17;1!UBERON:0001045;1.57e-17;1!CL:0000051;2.30e-15;53!CL:0000954;1.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.66e-18;1!DOID:0060073;4.44e-18;1!DOID:8675;4.44e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.66e-18,1;DOID:0060073,4.44e-18,1;DOID:8675,4.44e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.27e-11!3;UBERON:0004854!2.27e-11!3;UBERON:0009034!2.27e-11!3;UBERON:0002095!2.27e-11!3;UBERON:0004782!2.27e-11!3;UBERON:0003281!2.27e-11!3;UBERON:0009664!2.27e-11!3;UBERON:0002296!2.27e-11!3;UBERON:0005602!2.27e-11!3;UBERON:0001179!2.27e-11!3;UBERON:0006293!2.27e-11!3;UBERON:0004177!2.30e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.57e-17;1!UBERON:0001153;1.57e-17;1!UBERON:0009854;1.57e-17;1!UBERON:0002106;8.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,1.44e-17,1;UBERON:0001153,1.44e-17,1;UBERON:0001045,1.44e-17,1;UBERON:0002106,7.70e-07,3;UBERON:0004854,7.70e-07,3;UBERON:0009034,7.70e-07,3;UBERON:0002095,7.70e-07,3;UBERON:0004782,7.70e-07,3;UBERON:0003281,7.70e-07,3;UBERON:0009664,7.70e-07,3;UBERON:0002296,7.70e-07,3;UBERON:0005602,7.70e-07,3;UBERON:0001179,7.70e-07,3;UBERON:0006293,7.70e-07,3 | |||
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| ||
|short_description=p@chr13:80975508..80975547,+ | |short_description=p@chr13:80975508..80975547,+ | ||
}} | }} |
Latest revision as of 17:21, 24 July 2015
Short description: | p@chr13:80975508..80975547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:80975508..80975547, + |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.12e-43 | 24 |
pro-B cell | 2.12e-43 | 24 |
B cell | 2.48e-29 | 14 |
lymphocyte | 1.19e-24 | 53 |
common lymphoid progenitor | 1.19e-24 | 53 |
lymphoid lineage restricted progenitor cell | 8.01e-20 | 52 |
B-1 B cell | 4.44e-18 | 1 |
nongranular leukocyte | 6.62e-11 | 115 |
mature B cell | 1.03e-09 | 2 |
pre-B-II cell | 1.03e-09 | 2 |
transitional stage B cell | 1.03e-09 | 2 |
small pre-B-II cell | 1.03e-09 | 2 |
immature B cell | 1.03e-09 | 2 |
leukocyte | 4.07e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 3.41e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-07 | 161 |
hematopoietic stem cell | 3.09e-07 | 168 |
precursor B cell | 6.88e-07 | 3 |
hematopoietic cell | 7.92e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 1.44e-17 | 1 |
caecum | 1.44e-17 | 1 |
midgut | 1.44e-17 | 1 |
spleen | 7.70e-07 | 3 |
gastrointestinal system mesentery | 7.70e-07 | 3 |
stomach region | 7.70e-07 | 3 |
mesentery | 7.70e-07 | 3 |
gastrointestinal system serosa | 7.70e-07 | 3 |
mesentery of stomach | 7.70e-07 | 3 |
gut mesentery | 7.70e-07 | 3 |
dorsal mesentery | 7.70e-07 | 3 |
dorsal mesogastrium | 7.70e-07 | 3 |
peritoneal cavity | 7.70e-07 | 3 |
spleen primordium | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.66e-18 | 1 |
lymphatic system cancer | 4.44e-18 | 1 |
lymphosarcoma | 4.44e-18 | 1 |