FFCP PHASE1:Hg19::chr13:80914163..80914200,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:80914163..80914200,+
|short_description=p@chr13:80914163..80914200,+
|description=CAGE_peak_at_chr13:80914163..80914200,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:80914163..80914200,+ | |||
|description=CAGE_peak_at_chr13:80914163..80914200,+ | |||
|id=chr13:80914163..80914200,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.20e-26;5!CL:0002567;2.30e-15;3!CL:0000623;4.92e-15;3!CL:0000163;1.86e-14;9!CL:0000767;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.07e-26,5;CL:0002028,3.07e-26,5;CL:0002567,2.55e-15,3;CL:0000623,4.17e-15,3;CL:0000825,4.17e-15,3;CL:0000163,1.82e-14,9;CL:0000767,3.56e-07,3;CL:0002032,7.74e-07,161;CL:0000837,7.74e-07,161;CL:0000738,9.65e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.11e-16;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.85e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.02e-13!115;UBERON:0001049!3.30e-09!57;UBERON:0005068!3.30e-09!57;UBERON:0006241!3.30e-09!57;UBERON:0007135!3.30e-09!57;UBERON:0003075!8.67e-08!86;UBERON:0007284!8.67e-08!86;UBERON:0002616!1.52e-07!59;UBERON:0005743!5.98e-07!86;UBERON:0002346!7.96e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.47e-08;6!UBERON:0002106;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.48e-08,6;UBERON:0006215,1.48e-08,6;UBERON:0002106,2.27e-07,3;UBERON:0004854,2.27e-07,3;UBERON:0009034,2.27e-07,3;UBERON:0002095,2.27e-07,3;UBERON:0004782,2.27e-07,3;UBERON:0003281,2.27e-07,3;UBERON:0009664,2.27e-07,3;UBERON:0002296,2.27e-07,3;UBERON:0005602,2.27e-07,3;UBERON:0001179,2.27e-07,3;UBERON:0006293,2.27e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,3.59143007015371,2.95562122019805,3.22714203386085,1.18009283054671,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0,0,0.242584061187816,0.464858073811369,0.822335776043652,1.23882548358041,0.28769239232215,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.65156653411535,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.511946444617674,1.24930726552346,0.236777252044017,0,0.604820229674197,0.267440195783507,0.434473211648397,0,0,0,0,0,0.144846518960824,2.3858578411533,0.973269740605272,0,0,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0.797747763113191,0,0,0,0,0.860234595106124,0.694281003215189,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0,0,0,0,0.0892997282840798,0,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.900273288253207,0.103052529238439,0,0,0.506328996723799,0.389748020644795,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0,0,0,5.91195885475132,6.25143881493905,3.93923419527467,2.59415916150531,3.1560608356595,0.317489471460845,1.14596527667483,2.34434894420094,1.71072446022705,0.308482478109971,0.901029173531752,0.571652865261156,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,1.77327684181734,1.07813787429759,1.41177339907723,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.64341568457443,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0.850468526382578,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,0.0915694648183434,0,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0.282431402330337,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,1.94541993357815,0,0,0,0,0,0,0.28853842595289,0,0,0.59873811429845,0,0,0,0.561594356226918,0,0.47003968731907,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0.976940477010201,0.556812347790485,0,0.270455678475983,1.99843180798692,1.4098700508785,0,0.293016358543788,0.485442086998054,0,0,0,0,0,0,0.844016498463076,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0.306806047506464,0,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,6.10326945268333,5.97128003628613,4.13766666534966,0.438770794307945,0,0,0.307801034015188,0.113942055847001,0,0,0,0,0,1.06606955203727,0,0.784901281975124,0.332423363800313,0,0,0.167821586975843,0,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0,0.404406797884062,0.802577647298789,0.234264445725339,0,0,0.242780379534093,0.394584402849391,0,0.61214552326098,0.505492637027904,0,0.103688191397247,0,0.992975867626496,0.313932918407225,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0.397429223405979,0.633107959558787,0,0,0.85381197895741,0,0,0.114536596165916,0,0.288109595976299,0,0.471388069233591,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0,0.446342914883745,0.403100834920358,0,0,0,0,0.13480708770837,0,1.77813997338147,0.795229689809303,0.272406812223151,0.160753148465019,0,0,0,0.77380195455795,0.485996453264197,0,0,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.453248366080503,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0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| ||
|short_description=p@chr13:80914163..80914200,+ | |||
}} | }} |
Latest revision as of 17:20, 24 July 2015
Short description: | p@chr13:80914163..80914200, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:80914163..80914200, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.07e-26 | 5 |
basophil mast progenitor cell | 3.07e-26 | 5 |
light melanocyte | 2.55e-15 | 3 |
natural killer cell | 4.17e-15 | 3 |
pro-NK cell | 4.17e-15 | 3 |
endocrine cell | 1.82e-14 | 9 |
basophil | 3.56e-07 | 3 |
hematopoietic oligopotent progenitor cell | 7.74e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.74e-07 | 161 |
leukocyte | 9.65e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.48e-08 | 6 |
rhombic lip | 1.48e-08 | 6 |
spleen | 2.27e-07 | 3 |
gastrointestinal system mesentery | 2.27e-07 | 3 |
stomach region | 2.27e-07 | 3 |
mesentery | 2.27e-07 | 3 |
gastrointestinal system serosa | 2.27e-07 | 3 |
mesentery of stomach | 2.27e-07 | 3 |
gut mesentery | 2.27e-07 | 3 |
dorsal mesentery | 2.27e-07 | 3 |
dorsal mesogastrium | 2.27e-07 | 3 |
peritoneal cavity | 2.27e-07 | 3 |
spleen primordium | 2.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.09e-11 | 2 |