FFCP PHASE1:Hg19::chr13:75017232..75017235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:75017232..75017235,+ | |||
|coexpression_cluster_id=C1188 | |||
|description=CAGE_peak_at_chr13:75017232..75017235,+ | |description=CAGE_peak_at_chr13:75017232..75017235,+ | ||
|id=chr13:75017232..75017235,+ | |id=chr13:75017232..75017235,+ | ||
|ontology_enrichment_celltype=CL:0002159!2.90e-17!13;CL:0002076!8.83e-16!43;CL:0002621!2.15e-12!3;CL:0002166!4.50e-12!3;CL:0000223!1.60e-10!59;CL:0002368!6.54e-10!13;CL:0000244!4.80e-09!4;CL:0000731!4.80e-09!4;CL:0000575!3.33e-08!2;CL:0002251!9.81e-08!21;CL:0000066!1.69e-07!254 | |ontology_enrichment_celltype=CL:0002159!2.90e-17!13;CL:0002076!8.83e-16!43;CL:0002621!2.15e-12!3;CL:0002166!4.50e-12!3;CL:0000223!1.60e-10!59;CL:0002368!6.54e-10!13;CL:0000244!4.80e-09!4;CL:0000731!4.80e-09!4;CL:0000575!3.33e-08!2;CL:0002251!9.81e-08!21;CL:0000066!1.69e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.81e-54;3!CL:0002076;4.90e-16;42!CL:0002368;3.63e-13;13!CL:0002159;2.84e-12;14!CL:0000317;2.60e-10;2!CL:1000448;2.60e-10;2!CL:0002308;2.60e-10;2!CL:0002140;2.60e-10;2!CL:0000362;6.10e-09;9!CL:0002251;8.99e-09;20!CL:0002166;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.17e-54,3;CL:0002076,2.49e-15,42;CL:0002368,3.94e-13,13;CL:0002159,2.44e-12,14;CL:0000223,4.54e-11,58;CL:0000317,1.89e-10,2;CL:1000448,1.89e-10,2;CL:0002308,1.89e-10,2;CL:0002140,1.89e-10,2;CL:0000362,5.42e-09,9;CL:0002251,9.23e-09,20;CL:0002166,1.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.15e-12!3;UBERON:0001708!3.76e-09!4;UBERON:0001704!3.76e-09!4;UBERON:0000365!2.63e-07!5;UBERON:0003729!4.64e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.81e-54;3!UBERON:0000486;2.38e-24;12!UBERON:0003929;7.73e-24;7!UBERON:0003350;5.90e-21;8!UBERON:0001828;5.90e-21;8!UBERON:0010371;4.14e-15;31!UBERON:0003729;3.63e-13;13!UBERON:0002419;2.60e-10;2!UBERON:0007771;2.60e-10;2!UBERON:0003297;2.60e-10;2!UBERON:0001821;2.60e-10;2!UBERON:0003487;2.60e-10;2!UBERON:0001820;2.60e-10;2!UBERON:0000161;3.33e-09;19!UBERON:0000166;3.33e-09;19!UBERON:0000344;8.99e-09;20!UBERON:0004807;5.01e-08;22!UBERON:0005911;1.02e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.17e-54,3;UBERON:0003350,6.32e-21,8;UBERON:0001828,6.32e-21,8;UBERON:0003729,3.78e-13,13;UBERON:0002419,1.89e-10,2;UBERON:0007771,1.89e-10,2;UBERON:0003297,1.89e-10,2;UBERON:0001821,1.89e-10,2;UBERON:0003487,1.89e-10,2;UBERON:0001820,1.89e-10,2;UBERON:0005089,1.89e-10,2;UBERON:0005088,1.89e-10,2;UBERON:0000344,9.23e-09,20;UBERON:0001004,1.22e-08,74;UBERON:0000166,5.14e-08,22 | |||
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| ||
|short_description=p@chr13:75017232..75017235,+ | |short_description=p@chr13:75017232..75017235,+ | ||
}} | }} |
Latest revision as of 17:04, 24 July 2015
Short description: | p@chr13:75017232..75017235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75017232..75017235, + |
Coexpression cluster: | C1188_Urothelial_Gingival_Keratinocyte_Mallassezderived_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.17e-54 | 3 |
endo-epithelial cell | 2.49e-15 | 42 |
respiratory epithelial cell | 3.94e-13 | 13 |
general ecto-epithelial cell | 2.44e-12 | 14 |
endodermal cell | 4.54e-11 | 58 |
sebum secreting cell | 1.89e-10 | 2 |
epithelial cell of sweat gland | 1.89e-10 | 2 |
epithelial cell of skin gland | 1.89e-10 | 2 |
acinar cell of sebaceous gland | 1.89e-10 | 2 |
epidermal cell | 5.42e-09 | 9 |
epithelial cell of alimentary canal | 9.23e-09 | 20 |
epithelial cell of Malassez | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.17e-54 | 3 |
epithelium of mucosa | 6.32e-21 | 8 |
gingiva | 6.32e-21 | 8 |
mouth mucosa | 3.78e-13 | 13 |
skin gland | 1.89e-10 | 2 |
epidermis gland | 1.89e-10 | 2 |
gland of integumental system | 1.89e-10 | 2 |
sebaceous gland | 1.89e-10 | 2 |
skin sebaceous gland | 1.89e-10 | 2 |
sweat gland | 1.89e-10 | 2 |
sweat gland placode | 1.89e-10 | 2 |
sebaceous gland placode | 1.89e-10 | 2 |
mucosa | 9.23e-09 | 20 |
respiratory system | 1.22e-08 | 74 |
oral opening | 5.14e-08 | 22 |