FFCP PHASE1:Hg19::chr13:46275247..46275259,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46275247..46275259,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr13:46275247..46275259,- | |description=CAGE_peak_at_chr13:46275247..46275259,- | ||
|id=chr13:46275247..46275259,- | |id=chr13:46275247..46275259,- | ||
|ontology_enrichment_celltype=CL:0000945!2.49e-17!24;CL:0000826!2.49e-17!24;CL:0000080!7.98e-14!6;CL:0000838!1.60e-12!52;CL:0000542!2.92e-12!53;CL:0000051!2.92e-12!53;CL:0000946!6.33e-10!1;CL:0000786!6.33e-10!1;CL:0000980!6.33e-10!1 | |ontology_enrichment_celltype=CL:0000945!2.49e-17!24;CL:0000826!2.49e-17!24;CL:0000080!7.98e-14!6;CL:0000838!1.60e-12!52;CL:0000542!2.92e-12!53;CL:0000051!2.92e-12!53;CL:0000946!6.33e-10!1;CL:0000786!6.33e-10!1;CL:0000980!6.33e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.63e-23;24!CL:0000542;2.35e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.63e-23,24;CL:0000826,3.63e-23,24;CL:0000838,1.14e-20,52;CL:0000542,2.81e-20,53;CL:0000051,2.81e-20,53;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0000738,9.30e-08,136;CL:0000988,1.04e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.35e-10;53 | |||
|ontology_enrichment_disease=DOID:0060060!2.59e-10!1;DOID:0060061!2.59e-10!1;DOID:8691!2.59e-10!1;DOID:630!2.84e-10!1;DOID:0050177!2.84e-10!1;DOID:0050427!2.84e-10!1;DOID:2355!3.10e-10!1;DOID:0060058!1.81e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:630;4.59e-23;1!DOID:0050177;4.59e-23;1!DOID:0060060;4.59e-23;1!DOID:0060061;4.59e-23;1!DOID:0050427;4.59e-23;1!DOID:8691;4.59e-23;1!DOID:2355;4.59e-23;1!DOID:74;3.06e-12;2!DOID:0060058;1.05e-09;10!DOID:1287;9.36e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.28e-23,1;DOID:0060061,3.28e-23,1;DOID:8691,3.28e-23,1;DOID:630,4.10e-23,1;DOID:0050177,4.10e-23,1;DOID:0050427,4.10e-23,1;DOID:2355,5.13e-23,1;DOID:74,3.24e-12,2;DOID:0060058,1.01e-09,10;DOID:1287,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002363!1.17e-09!1;UBERON:0007647!1.17e-09!1;UBERON:0010115!1.17e-09!1;UBERON:0002331!1.68e-08!10;UBERON:0000358!1.68e-08!10;UBERON:0000307!1.68e-08!10;UBERON:0000091!1.68e-08!10;UBERON:0000087!1.68e-08!10;UBERON:0007806!1.68e-08!10;UBERON:0008780!1.68e-08!10;UBERON:0005728!1.68e-08!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34893840235659,6.56804715599566,5.66717625458491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6686901581256,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18542664892098,0,0,0,0,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34893840235659,6.56804715599566,5.66717625458491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6686901581256,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18542664892098,0,0,0,0,0,0,0,0,0,0.788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p@chr13:46275247..46275259,- | |short_description=p@chr13:46275247..46275259,- | ||
}} | }} |
Latest revision as of 16:17, 24 July 2015
Short description: | p@chr13:46275247..46275259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46275247..46275259, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.63e-23 | 24 |
pro-B cell | 3.63e-23 | 24 |
lymphoid lineage restricted progenitor cell | 1.14e-20 | 52 |
lymphocyte | 2.81e-20 | 53 |
common lymphoid progenitor | 2.81e-20 | 53 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
leukocyte | 9.30e-08 | 136 |
hematopoietic cell | 1.04e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.28e-23 | 1 |
cutaneous T cell lymphoma | 3.28e-23 | 1 |
mycosis fungoides | 3.28e-23 | 1 |
genetic disease | 4.10e-23 | 1 |
monogenic disease | 4.10e-23 | 1 |
xeroderma pigmentosum | 4.10e-23 | 1 |
anemia | 5.13e-23 | 1 |
hematopoietic system disease | 3.24e-12 | 2 |
lymphoma | 1.01e-09 | 10 |
cardiovascular system disease | 9.63e-07 | 4 |