FFCP PHASE1:Hg19::chr13:45915545..45915601,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412946,ENST00000520590,ENST00000520622_5end | |association_with_transcript=0bp_to_ENST00000412946,ENST00000520590,ENST00000520622_5end | ||
|cluster_id=chr13:45915545..45915601,+ | |||
|coexpression_cluster_id=C3375 | |||
|description=CAGE_peak_1_at_ENST00000412946_5end,CAGE_peak_1_at_ENST00000520590_5end,CAGE_peak_1_at_ENST00000520622_5end | |description=CAGE_peak_1_at_ENST00000412946_5end,CAGE_peak_1_at_ENST00000520590_5end,CAGE_peak_1_at_ENST00000520622_5end | ||
|id=chr13:45915545..45915601,+ | |id=chr13:45915545..45915601,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.47e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.95e-37!115;UBERON:0001049!5.59e-32!57;UBERON:0005068!5.59e-32!57;UBERON:0006241!5.59e-32!57;UBERON:0007135!5.59e-32!57;UBERON:0000073!2.48e-30!94;UBERON:0001016!2.48e-30!94;UBERON:0005743!6.61e-30!86;UBERON:0001017!9.72e-30!82;UBERON:0002616!5.32e-27!59;UBERON:0000955!1.88e-24!69;UBERON:0006238!1.88e-24!69;UBERON:0003075!1.94e-24!86;UBERON:0007284!1.94e-24!86;UBERON:0003080!7.83e-24!42;UBERON:0002780!1.13e-23!41;UBERON:0001890!1.13e-23!41;UBERON:0006240!1.13e-23!41;UBERON:0002346!1.14e-23!90;UBERON:0002020!1.88e-19!34;UBERON:0003528!1.88e-19!34;UBERON:0001893!2.06e-19!34;UBERON:0002791!6.95e-19!33;UBERON:0001869!3.80e-18!32;UBERON:0004121!3.82e-17!169;UBERON:0000924!5.96e-17!173;UBERON:0006601!5.96e-17!173;UBERON:0003056!2.32e-16!61;UBERON:0002619!2.10e-14!22;UBERON:0000956!5.01e-14!25;UBERON:0000203!5.01e-14!25;UBERON:0001950!2.41e-13!20;UBERON:0000153!7.12e-13!129;UBERON:0007811!7.12e-13!129;UBERON:0000033!1.40e-11!123;UBERON:0003076!3.29e-09!15;UBERON:0003057!3.29e-09!15;UBERON:0004732!4.95e-08!13;UBERON:0004733!2.16e-07!12;UBERON:0002028!2.16e-07!12;UBERON:0007277!2.16e-07!12;UBERON:0002308!6.17e-07!9;UBERON:0000125!6.17e-07!9;UBERON:0002420!8.33e-07!9;UBERON:0007245!8.33e-07!9;UBERON:0010009!8.33e-07!9;UBERON:0010011!8.33e-07!9;UBERON:0000454!8.33e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!7.95e-37!115;UBERON:0001049!5.59e-32!57;UBERON:0005068!5.59e-32!57;UBERON:0006241!5.59e-32!57;UBERON:0007135!5.59e-32!57;UBERON:0000073!2.48e-30!94;UBERON:0001016!2.48e-30!94;UBERON:0005743!6.61e-30!86;UBERON:0001017!9.72e-30!82;UBERON:0002616!5.32e-27!59;UBERON:0000955!1.88e-24!69;UBERON:0006238!1.88e-24!69;UBERON:0003075!1.94e-24!86;UBERON:0007284!1.94e-24!86;UBERON:0003080!7.83e-24!42;UBERON:0002780!1.13e-23!41;UBERON:0001890!1.13e-23!41;UBERON:0006240!1.13e-23!41;UBERON:0002346!1.14e-23!90;UBERON:0002020!1.88e-19!34;UBERON:0003528!1.88e-19!34;UBERON:0001893!2.06e-19!34;UBERON:0002791!6.95e-19!33;UBERON:0001869!3.80e-18!32;UBERON:0004121!3.82e-17!169;UBERON:0000924!5.96e-17!173;UBERON:0006601!5.96e-17!173;UBERON:0003056!2.32e-16!61;UBERON:0002619!2.10e-14!22;UBERON:0000956!5.01e-14!25;UBERON:0000203!5.01e-14!25;UBERON:0001950!2.41e-13!20;UBERON:0000153!7.12e-13!129;UBERON:0007811!7.12e-13!129;UBERON:0000033!1.40e-11!123;UBERON:0003076!3.29e-09!15;UBERON:0003057!3.29e-09!15;UBERON:0004732!4.95e-08!13;UBERON:0004733!2.16e-07!12;UBERON:0002028!2.16e-07!12;UBERON:0007277!2.16e-07!12;UBERON:0002308!6.17e-07!9;UBERON:0000125!6.17e-07!9;UBERON:0002420!8.33e-07!9;UBERON:0007245!8.33e-07!9;UBERON:0010009!8.33e-07!9;UBERON:0010011!8.33e-07!9;UBERON:0000454!8.33e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.85e-20;41!UBERON:0001890;2.85e-20;41!UBERON:0000073;5.28e-20;53!UBERON:0002616;5.28e-20;53!UBERON:0003528;1.95e-19;34!UBERON:0002020;1.95e-19;34!UBERON:0001893;2.22e-19;34!UBERON:0002791;3.48e-19;32!UBERON:0001869;4.41e-19;32!UBERON:0002619;5.40e-17;22!UBERON:0000956;3.16e-16;25!UBERON:0000203;3.16e-16;25!UBERON:0001950;9.96e-16;20!UBERON:0000955;1.29e-12;68!UBERON:0001017;4.91e-12;75!UBERON:0007023;1.89e-11;114!UBERON:0001016;3.42e-11;83!UBERON:0004732;5.50e-09;13!UBERON:0000922;1.40e-08;49!UBERON:0004733;3.19e-08;12!UBERON:0002028;3.19e-08;12!UBERON:0000125;5.70e-08;9!UBERON:0002308;5.70e-08;9!UBERON:0002420;8.16e-08;9!UBERON:0007245;8.16e-08;9!UBERON:0010009;8.16e-08;9!UBERON:0010011;8.16e-08;9!UBERON:0000454;8.16e-08;9 | |||
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| ||
|short_description=p1@ENST00000412946,p1@ENST00000520590,p1@ENST00000520622 | |short_description=p1@ENST00000412946,p1@ENST00000520590,p1@ENST00000520622 | ||
}} | }} |
Latest revision as of 16:16, 24 July 2015
Short description: | p1@ENST00000412946, p1@ENST00000520590, p1@ENST00000520622 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000412946_5end, CAGE_peak_1_at_ENST00000520590_5end, CAGE_peak_1_at_ENST00000520622_5end |
Coexpression cluster: | C3375_testis_parietal_brain_occipital_temporal_cerebellum_duodenum |
Association with transcript: | 0bp_to_ENST00000412946, ENST00000520590, ENST00000520622_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data