FFCP PHASE1:Hg19::chr13:45781208..45781227,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:45781208..45781227,+ | |||
|coexpression_cluster_id=C2265 | |||
|description=CAGE_peak_at_chr13:45781208..45781227,+ | |||
|id=chr13:45781208..45781227,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.78e-09!246;CL:0002321!3.04e-09!248;CL:0002076!8.96e-09!43;CL:0000076!2.73e-07!62;CL:0000066!3.11e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002621;2.88e-30;3!CL:0000317;1.42e-20;2!CL:1000448;1.42e-20;2!CL:0002308;1.42e-20;2!CL:0002140;1.42e-20;2!CL:0002159;6.82e-18;14!CL:0002166;1.19e-14;3!CL:0002076;5.75e-11;42!CL:0000362;1.50e-10;9!CL:0000622;8.50e-09;5!CL:0002077;9.20e-09;34!CL:0000154;1.80e-07;6!CL:0002368;2.34e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.03e-30,3;CL:0000317,2.35e-20,2;CL:1000448,2.35e-20,2;CL:0002308,2.35e-20,2;CL:0002140,2.35e-20,2;CL:0002159,7.86e-18,14;CL:0002166,1.15e-14,3;CL:0002076,6.42e-11,42;CL:0000362,1.74e-10,9;CL:0002077,2.97e-10,34;CL:0000622,1.04e-08,5;CL:0000223,1.03e-07,58;CL:0002321,1.10e-07,250;CL:0000066,1.22e-07,253;CL:0000154,2.11e-07,6;CL:0002368,2.15e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;3.63e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.68e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.30e-07!129;UBERON:0007811!1.30e-07!129;UBERON:0000033!1.61e-07!123;UBERON:0004121!3.23e-07!169;UBERON:0000924!9.41e-07!173;UBERON:0006601!9.41e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.88e-30;3!UBERON:0002419;1.42e-20;2!UBERON:0007771;1.42e-20;2!UBERON:0003297;1.42e-20;2!UBERON:0001821;1.42e-20;2!UBERON:0003487;1.42e-20;2!UBERON:0001820;1.42e-20;2!UBERON:0000486;1.97e-13;12!UBERON:0003929;2.39e-13;7!UBERON:0003350;9.44e-12;8!UBERON:0001828;9.44e-12;8!UBERON:0001708;3.20e-11;4!UBERON:0008895;3.20e-11;4!UBERON:0010371;3.40e-11;31!UBERON:0011159;3.75e-09;5!UBERON:0003729;1.98e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.03e-30,3;UBERON:0002419,2.35e-20,2;UBERON:0007771,2.35e-20,2;UBERON:0003297,2.35e-20,2;UBERON:0001821,2.35e-20,2;UBERON:0003487,2.35e-20,2;UBERON:0001820,2.35e-20,2;UBERON:0005089,2.35e-20,2;UBERON:0005088,2.35e-20,2;UBERON:0003350,9.62e-12,8;UBERON:0001828,9.62e-12,8;UBERON:0001708,3.12e-11,4;UBERON:0008895,3.12e-11,4;UBERON:0011159,3.67e-09,5;UBERON:0010188,8.95e-08,6;UBERON:0002539,8.95e-08,6;UBERON:0008816,8.95e-08,6;UBERON:0003729,2.01e-07,13;UBERON:0003102,5.46e-07,99 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.886917589850256,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.886413581652058,0.529636723252875,0.286836620748814,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,1.35282597214308,1.36373060295417,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,3.84125998930189,0,0.703702806881416,0.462942225792648,0,0,0,0.463721619900307,0.234817388471643,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,5.20744597416465,2.26840155587818,0.358234090811393,0,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0.199945982364114,0,0,0,0.479249710983165,0,0,0.723906533337896,0.205476322550383,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,4.21063587636898,0.184161977871793,0.229628896329213,0,0,0,0.462092022626489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,1.14853107599234,1.30012049207304,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,1.65284915360978,1.15314040419064,1.53135254993501,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.673554789078584,0,0,0,0,0,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,2.07875276582847,0.614321404198464,0,0.140669416410513,0,0,0,0,0.552567831062295,0,6.95427041014653,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.609414446062818,0,1.54787429224455,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.126621591911757,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.443565449968902,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0.521988583930423,0,0,0,0.358177682162975,0,0.219284049578707,0,0.578742114812744,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.139879507719444,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0,0.322951291263702,0,0.785181748008205,0.11796972334774,0.733714394086716,0.115525666150338,0.762764190934334,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0.127762427639595,0,0.672567444437648,0,0,0,0,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,0.431855182437243,0.47775168788705,0.142953088353313,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.124149428591716,0,0.25458863311266,0,0,0,0.0673520530145875,0,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr13:45781208..45781227,+ | |||
}} |
Latest revision as of 16:15, 24 July 2015
Short description: | p@chr13:45781208..45781227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45781208..45781227, + |
Coexpression cluster: | C2265_Mallassezderived_astrocytoma_Prostate_malignant_oral_Gingival_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.03e-30 | 3 |
sebum secreting cell | 2.35e-20 | 2 |
epithelial cell of sweat gland | 2.35e-20 | 2 |
epithelial cell of skin gland | 2.35e-20 | 2 |
acinar cell of sebaceous gland | 2.35e-20 | 2 |
general ecto-epithelial cell | 7.86e-18 | 14 |
epithelial cell of Malassez | 1.15e-14 | 3 |
endo-epithelial cell | 6.42e-11 | 42 |
epidermal cell | 1.74e-10 | 9 |
ecto-epithelial cell | 2.97e-10 | 34 |
acinar cell | 1.04e-08 | 5 |
endodermal cell | 1.03e-07 | 58 |
embryonic cell | 1.10e-07 | 250 |
epithelial cell | 1.22e-07 | 253 |
protein secreting cell | 2.11e-07 | 6 |
respiratory epithelial cell | 2.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.03e-30 | 3 |
skin gland | 2.35e-20 | 2 |
epidermis gland | 2.35e-20 | 2 |
gland of integumental system | 2.35e-20 | 2 |
sebaceous gland | 2.35e-20 | 2 |
skin sebaceous gland | 2.35e-20 | 2 |
sweat gland | 2.35e-20 | 2 |
sweat gland placode | 2.35e-20 | 2 |
sebaceous gland placode | 2.35e-20 | 2 |
epithelium of mucosa | 9.62e-12 | 8 |
gingiva | 9.62e-12 | 8 |
jaw skeleton | 3.12e-11 | 4 |
splanchnocranium | 3.12e-11 | 4 |
primary subdivision of cranial skeletal system | 3.67e-09 | 5 |
protuberance | 8.95e-08 | 6 |
pharyngeal arch | 8.95e-08 | 6 |
embryonic head | 8.95e-08 | 6 |
mouth mucosa | 2.01e-07 | 13 |
surface structure | 5.46e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.68e-11 | 1 |