FFCP PHASE1:Hg19::chr13:45781066..45781080,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:45781066..45781080,+ | |||
|coexpression_cluster_id=C2265 | |||
|description=CAGE_peak_at_chr13:45781066..45781080,+ | |||
|id=chr13:45781066..45781080,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.17e-11!43;CL:0000076!1.35e-08!62;CL:0000220!1.48e-08!246;CL:0002321!2.52e-08!248;CL:0000223!9.03e-08!59;CL:0000066!2.40e-07!254;CL:0002159!4.62e-07!13;CL:0002368!4.66e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.42e-15;42!CL:0002368;5.09e-15;13!CL:0002159;1.35e-14;14!CL:0002166;2.50e-14;3!CL:0002621;4.03e-14;3!CL:0000317;8.37e-10;2!CL:1000448;8.37e-10;2!CL:0002308;8.37e-10;2!CL:0002140;8.37e-10;2!CL:0002251;1.25e-09;20!CL:0000056;2.05e-09;4!CL:0000362;7.05e-08;9!CL:0002202;1.58e-07;9!CL:0002632;1.58e-07;9!CL:0000240;6.53e-07;6!CL:0000311;6.53e-07;6!CL:0000079;6.53e-07;6!CL:0000237;6.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.51e-19,42;CL:0002368,5.27e-15,13;CL:0002159,1.31e-14,14;CL:0002166,2.51e-14,3;CL:0002621,4.04e-14,3;CL:0000223,4.94e-13,58;CL:0002321,1.56e-11,250;CL:0000066,1.32e-10,253;CL:0000076,8.33e-10,63;CL:0000317,8.39e-10,2;CL:1000448,8.39e-10,2;CL:0002308,8.39e-10,2;CL:0002140,8.39e-10,2;CL:0002251,1.41e-09,20;CL:0000515,1.85e-09,4;CL:0000221,3.04e-08,72;CL:0000362,6.87e-08,9;CL:0002202,1.53e-07,9;CL:0002632,1.53e-07,9;CL:0002077,6.06e-07,34;CL:0000240,6.34e-07,6;CL:0000311,6.34e-07,6;CL:0000079,6.34e-07,6;CL:0000237,6.34e-07,6;CL:0000036,6.34e-07,6;CL:0000357,6.34e-07,6;CL:0000114,6.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;2.05e-09;4!CL:0000223;5.40e-07;58!CL:0000357;6.53e-07;6!CL:0000114;6.53e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!7.38e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.32e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.36e-17,14 | |||
|ontology_enrichment_uberon=UBERON:0000033!2.77e-10!123;UBERON:0000153!4.35e-10!129;UBERON:0007811!4.35e-10!129;UBERON:0004121!5.54e-10!169;UBERON:0000924!2.33e-09!173;UBERON:0006601!2.33e-09!173;UBERON:0000475!5.41e-08!365;UBERON:0003075!2.46e-07!86;UBERON:0007284!2.46e-07!86;UBERON:0001049!6.32e-07!57;UBERON:0005068!6.32e-07!57;UBERON:0006241!6.32e-07!57;UBERON:0007135!6.32e-07!57;UBERON:0003729!9.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;2.32e-15;13!UBERON:0001949;4.03e-14;3!UBERON:0001708;7.49e-11;4!UBERON:0008895;7.49e-11;4!UBERON:0003343;4.92e-10;4!UBERON:0004785;4.92e-10;4!UBERON:0002419;8.37e-10;2!UBERON:0007771;8.37e-10;2!UBERON:0003297;8.37e-10;2!UBERON:0001821;8.37e-10;2!UBERON:0003487;8.37e-10;2!UBERON:0001820;8.37e-10;2!UBERON:0000344;1.25e-09;20!UBERON:0000486;8.16e-09;12!UBERON:0011159;9.31e-09;5!UBERON:0000161;1.28e-07;19!UBERON:0000166;1.28e-07;19!UBERON:0000974;8.00e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,2.81e-15,13;UBERON:0001949,4.04e-14,3;UBERON:0001708,7.50e-11,4;UBERON:0008895,7.50e-11,4;UBERON:0003343,6.41e-10,4;UBERON:0004785,6.41e-10,4;UBERON:0002419,8.39e-10,2;UBERON:0007771,8.39e-10,2;UBERON:0003297,8.39e-10,2;UBERON:0001821,8.39e-10,2;UBERON:0003487,8.39e-10,2;UBERON:0001820,8.39e-10,2;UBERON:0005089,8.39e-10,2;UBERON:0005088,8.39e-10,2;UBERON:0000344,1.41e-09,20;UBERON:0011159,9.32e-09,5;UBERON:0003102,1.94e-07,99;UBERON:0010188,2.35e-07,6;UBERON:0002539,2.35e-07,6;UBERON:0008816,2.35e-07,6;UBERON:0001004,7.25e-07,74 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0,0.123121058076788,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,3.67768489791571,0.6024118375565,2.21852406100073,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.665188192387692,0.087834785693126,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,1.61131726843659,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.379891534993739,0.529636723252875,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0.600182192168805,0.412210116953756,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,1.0075209822764,0,7.92369497969517,7.36414525595254,14.6270343648392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14601598288303,0,2.51322431029077,2.22212268380471,0,0,0,0.34779121492523,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,10.3107217385455,23.8534622042381,13.0433089462996,3.76145795351963,2.61570544662566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,1.59259437334337,0,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.713715955188647,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,15.8400111539595,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,6.89118645595407,5.20048196829217,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,5.2891172915513,3.2672311452068,3.1903178123646,0.809262246844399,0.464845549297286,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.92947049429925,0,0,0.0982490410131212,0,0,0,0,0,0,1.82822014178473,2.01090682660736,0,0,1.72202149068492,0,0.443430153536676,3.90529780351831,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0.422008249231538,0,0,0,0,0,0,16.3629892003448,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.137934482855,0,0,0,0.291604613383254,0,0,0,0,0.331737779793674,0.295547618953547,0,0,0.41827123283581,0,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.587954384486266,1.74118413160805,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0,0.126621591911757,0,0.320635281006135,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0.313808538937,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.272406812223151,0,0,0,0.899895566206002,0,0.182248669974074,0.670869375198532,0,0,0,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,1.02232813071253,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,8.29843635101236,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0,1.8747061194316,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,2.06997209985487,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0.398095888698616,1.20008329398946,0.343395705182793,0,0,0,0.428883182749851,0.260994291965212,0,0,0,0.358177682162975,0.308801447160972,0.219284049578707,0.176689145945881,0.771656153083659,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0.39997479170986,0,0,0,0,0.839277046316667,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0,0,0,0,0,9.32403325759743,1.1796972334774,2.20114318226015,0.346576998451015,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0.766574565837572,0,0.336283722218824,0,0.227662191351298,0,0,0.514464028312255,0.203909198930495,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0.691259661814092,0,3.54996002191696,2.98246916657052,0.423387050190929,0.22910686854405,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0.178553938605658,2.47026410200984,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0.814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:45781066..45781080,+ | |||
}} |
Latest revision as of 16:15, 24 July 2015
Short description: | p@chr13:45781066..45781080, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45781066..45781080, + |
Coexpression cluster: | C2265_Mallassezderived_astrocytoma_Prostate_malignant_oral_Gingival_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.51e-19 | 42 |
respiratory epithelial cell | 5.27e-15 | 13 |
general ecto-epithelial cell | 1.31e-14 | 14 |
epithelial cell of Malassez | 2.51e-14 | 3 |
gingival epithelial cell | 4.04e-14 | 3 |
endodermal cell | 4.94e-13 | 58 |
embryonic cell | 1.56e-11 | 250 |
epithelial cell | 1.32e-10 | 253 |
squamous epithelial cell | 8.33e-10 | 63 |
sebum secreting cell | 8.39e-10 | 2 |
epithelial cell of sweat gland | 8.39e-10 | 2 |
epithelial cell of skin gland | 8.39e-10 | 2 |
acinar cell of sebaceous gland | 8.39e-10 | 2 |
epithelial cell of alimentary canal | 1.41e-09 | 20 |
skeletal muscle myoblast | 1.85e-09 | 4 |
ectodermal cell | 3.04e-08 | 72 |
epidermal cell | 6.87e-08 | 9 |
epithelial cell of tracheobronchial tree | 1.53e-07 | 9 |
epithelial cell of lower respiratory tract | 1.53e-07 | 9 |
ecto-epithelial cell | 6.06e-07 | 34 |
stratified squamous epithelial cell | 6.34e-07 | 6 |
keratin accumulating cell | 6.34e-07 | 6 |
stratified epithelial cell | 6.34e-07 | 6 |
keratinizing barrier epithelial cell | 6.34e-07 | 6 |
epithelial fate stem cell | 6.34e-07 | 6 |
stratified epithelial stem cell | 6.34e-07 | 6 |
surface ectodermal cell | 6.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 2.81e-15 | 13 |
gingival epithelium | 4.04e-14 | 3 |
jaw skeleton | 7.50e-11 | 4 |
splanchnocranium | 7.50e-11 | 4 |
mucosa of oral region | 6.41e-10 | 4 |
respiratory system mucosa | 6.41e-10 | 4 |
skin gland | 8.39e-10 | 2 |
epidermis gland | 8.39e-10 | 2 |
gland of integumental system | 8.39e-10 | 2 |
sebaceous gland | 8.39e-10 | 2 |
skin sebaceous gland | 8.39e-10 | 2 |
sweat gland | 8.39e-10 | 2 |
sweat gland placode | 8.39e-10 | 2 |
sebaceous gland placode | 8.39e-10 | 2 |
mucosa | 1.41e-09 | 20 |
primary subdivision of cranial skeletal system | 9.32e-09 | 5 |
surface structure | 1.94e-07 | 99 |
protuberance | 2.35e-07 | 6 |
pharyngeal arch | 2.35e-07 | 6 |
embryonic head | 2.35e-07 | 6 |
respiratory system | 7.25e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.36e-17 | 14 |