FFCP PHASE1:Hg19::chr13:43321584..43321597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:43321584..43321597,- | |||
|coexpression_cluster_id=C81 | |coexpression_cluster_id=C81 | ||
|description=CAGE_peak_at_chr13:43321584..43321597,- | |description=CAGE_peak_at_chr13:43321584..43321597,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!7.60e-07!3;CL:0000861!7.60e-07!3 | |ontology_enrichment_celltype=CL:0002150!7.60e-07!3;CL:0000861!7.60e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002367;1.64e-09;2!CL:0002541;9.37e-07;3 | |ontology_enrichment_celltype_v019=CL:0002367;1.64e-09;2!CL:0002541;9.37e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002367,1.71e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.03e-09;2!UBERON:0008947;1.32e-09;29!UBERON:0007297;1.64e-09;2 | |ontology_enrichment_development_v019=UBERON:0006965;1.03e-09;2!UBERON:0008947;1.32e-09;29!UBERON:0007297;1.64e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-08!115;UBERON:0002308!4.96e-08!9;UBERON:0000125!4.96e-08!9 | |ontology_enrichment_uberon=UBERON:0007023!1.07e-08!115;UBERON:0002308!4.96e-08!9;UBERON:0000125!4.96e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.72e-18;1!UBERON:0006518;5.72e-18;1!UBERON:0008949;5.72e-18;1!UBERON:0000101;5.72e-18;1!UBERON:0002167;5.72e-18;1!UBERON:0001301;1.12e-17;1!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.64e-09;2!UBERON:0005969;1.64e-09;2!UBERON:0003956;1.64e-09;2!UBERON:0002048;1.75e-07;22!UBERON:0000117;1.75e-07;22!UBERON:0000171;1.75e-07;22!UBERON:0000170;1.75e-07;22!UBERON:0003124;9.37e-07;3!UBERON:0000920;9.37e-07;3!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002171;5.72e-18;1!UBERON:0006518;5.72e-18;1!UBERON:0008949;5.72e-18;1!UBERON:0000101;5.72e-18;1!UBERON:0002167;5.72e-18;1!UBERON:0001301;1.12e-17;1!UBERON:0003127;8.69e-10;2!UBERON:0000341;1.64e-09;2!UBERON:0005969;1.64e-09;2!UBERON:0003956;1.64e-09;2!UBERON:0002048;1.75e-07;22!UBERON:0000117;1.75e-07;22!UBERON:0000171;1.75e-07;22!UBERON:0000170;1.75e-07;22!UBERON:0003124;9.37e-07;3!UBERON:0000920;9.37e-07;3!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.26e-18,1;UBERON:0006518,5.26e-18,1;UBERON:0008949,5.26e-18,1;UBERON:0000101,5.26e-18,1;UBERON:0002167,5.26e-18,1;UBERON:0001301,8.72e-18,1;UBERON:0003127,8.69e-10,2;UBERON:0000341,1.57e-09,2;UBERON:0005969,1.71e-09,2;UBERON:0003956,1.71e-09,2;UBERON:0005178,3.11e-08,34;UBERON:0002224,3.11e-08,34;UBERON:0005181,5.26e-08,35;UBERON:0002048,1.73e-07,22;UBERON:0000117,1.73e-07,22;UBERON:0000171,1.73e-07,22;UBERON:0000170,1.73e-07,22;UBERON:0005597,1.73e-07,22;UBERON:0000118,1.73e-07,22;UBERON:0008947,2.16e-07,38;UBERON:0003258,2.16e-07,38;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3 | |||
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| ||
|short_description=p@chr13:43321584..43321597,- | |short_description=p@chr13:43321584..43321597,- | ||
}} | }} |
Latest revision as of 16:06, 24 July 2015
Short description: | p@chr13:43321584..43321597, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43321584..43321597, - |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 1.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.26e-18 | 1 |
right lung lobe | 5.26e-18 | 1 |
lower lobe of lung | 5.26e-18 | 1 |
lobe of lung | 5.26e-18 | 1 |
right lung | 5.26e-18 | 1 |
epididymis | 8.72e-18 | 1 |
open tracheal system trachea | 8.69e-10 | 2 |
throat | 1.57e-09 | 2 |
reticulum trabeculare | 1.71e-09 | 2 |
aqueous drainage system | 1.71e-09 | 2 |
thoracic cavity element | 3.11e-08 | 34 |
thoracic cavity | 3.11e-08 | 34 |
thoracic segment organ | 5.26e-08 | 35 |
lung | 1.73e-07 | 22 |
respiratory tube | 1.73e-07 | 22 |
respiration organ | 1.73e-07 | 22 |
pair of lungs | 1.73e-07 | 22 |
lung primordium | 1.73e-07 | 22 |
lung bud | 1.73e-07 | 22 |
respiratory primordium | 2.16e-07 | 38 |
endoderm of foregut | 2.16e-07 | 38 |
male genital duct | 8.62e-07 | 3 |
internal male genitalia | 8.62e-07 | 3 |