FFCP PHASE1:Hg19::chr13:36052762..36052767,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:36052762..36052767,- | |||
|coexpression_cluster_id=C699 | |||
|description=CAGE_peak_at_chr13:36052762..36052767,- | |||
|id=chr13:36052762..36052767,- | |||
|ontology_enrichment_celltype=CL:0000064!9.59e-26!3;CL:0005012!9.59e-26!3;CL:0000067!9.59e-26!3;CL:0002304!9.59e-26!3;CL:0000075!6.06e-23!27;CL:0000197!1.98e-21!6;CL:0000098!1.98e-21!6;CL:0002167!1.98e-21!6;CL:0000710!3.87e-19!20;CL:0000133!3.85e-14!59;CL:0000221!1.63e-11!71;CL:0002077!2.68e-11!33;CL:0002574!2.77e-09!1;CL:0000306!5.30e-09!4;CL:0002222!5.30e-09!4;CL:0002224!5.30e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.50e-118;3!CL:0000067;9.50e-118;3!CL:0005012;9.50e-118;3!CL:0002304;9.50e-118;3!CL:0000075;5.12e-24;27!CL:0000710;1.38e-18;20!CL:0002077;2.09e-11;34!CL:0000306;3.42e-11;4!CL:0002222;3.42e-11;4!CL:0002224;3.42e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.78e-118,3;CL:0000067,7.78e-118,3;CL:0005012,7.78e-118,3;CL:0002304,7.78e-118,3;CL:0000075,4.97e-24,27;CL:0000710,1.34e-18,20;CL:0002077,2.66e-11,34;CL:0000306,3.42e-11,4;CL:0002222,3.42e-11,4;CL:0002224,3.42e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.31e-14;3 | |||
|ontology_enrichment_disease=DOID:169!1.42e-12!6;DOID:171!9.60e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!9.59e-26!3;UBERON:0001775!9.59e-26!3;UBERON:0000488!1.81e-19!4;UBERON:0007625!1.29e-18!11;UBERON:0000019!3.62e-15!19;UBERON:0000047!3.62e-15!19;UBERON:0004088!3.62e-15!19;UBERON:0003072!3.62e-15!19;UBERON:0003071!3.62e-15!19;UBERON:0004128!3.62e-15!19;UBERON:0000013!5.63e-15!5;UBERON:0002410!5.63e-15!5;UBERON:0002680!1.08e-14!9;UBERON:0001895!1.08e-14!9;UBERON:0010092!1.08e-14!9;UBERON:0001801!1.34e-14!14;UBERON:0000970!2.19e-14!20;UBERON:0002104!1.12e-13!21;UBERON:0001456!1.12e-13!21;UBERON:0003075!2.20e-13!86;UBERON:0007284!2.20e-13!86;UBERON:0002203!3.62e-13!6;UBERON:0001768!3.62e-13!6;UBERON:0002037!6.13e-13!6;UBERON:0006215!6.13e-13!6;UBERON:0002346!1.08e-12!90;UBERON:0000020!1.91e-12!23;UBERON:0001032!6.60e-12!24;UBERON:0004456!6.60e-12!24;UBERON:0004733!4.59e-11!12;UBERON:0002028!4.59e-11!12;UBERON:0007277!4.59e-11!12;UBERON:0004121!1.81e-10!169;UBERON:0004732!3.17e-10!13;UBERON:0000924!3.69e-10!173;UBERON:0006601!3.69e-10!173;UBERON:0005085!9.11e-10!29;UBERON:0002135!1.99e-09!1;UBERON:0002902!5.28e-09!1;UBERON:0009899!5.28e-09!1;UBERON:0010077!5.30e-09!4;UBERON:0005389!5.30e-09!4;UBERON:0000484!5.30e-09!4;UBERON:0002546!5.30e-09!4;UBERON:0000965!5.30e-09!4;UBERON:0001803!5.30e-09!4;UBERON:0003073!5.30e-09!4;UBERON:0005426!5.30e-09!4;UBERON:0002581!5.72e-09!1;UBERON:0003076!7.02e-09!15;UBERON:0003057!7.02e-09!15;UBERON:0000033!1.30e-08!123;UBERON:0000010!1.49e-08!8;UBERON:0000073!4.01e-08!94;UBERON:0001016!4.01e-08!94;UBERON:0000153!4.11e-08!129;UBERON:0007811!4.11e-08!129;UBERON:0002200!2.14e-07!11;UBERON:0006876!2.14e-07!11;UBERON:0003056!2.78e-07!61;UBERON:0000063!7.89e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;9.50e-118;3!UBERON:0001775;9.50e-118;3!UBERON:0000488;1.21e-88;4!UBERON:0002203;1.64e-59;6!UBERON:0001768;1.64e-59;6!UBERON:0002200;1.64e-59;6!UBERON:0007625;1.44e-57;11!UBERON:0001801;1.87e-45;14!UBERON:0000019;9.47e-34;19!UBERON:0000047;9.47e-34;19!UBERON:0004088;9.47e-34;19!UBERON:0010230;9.47e-34;19!UBERON:0006876;5.64e-33;11!UBERON:0000970;4.14e-32;20!UBERON:0002104;1.26e-30;21!UBERON:0001456;1.26e-30;21!UBERON:0000020;4.85e-28;23!UBERON:0001032;6.56e-27;24!UBERON:0004456;6.56e-27;24!UBERON:0010371;8.45e-21;31!UBERON:0010077;3.42e-11;4!UBERON:0005389;3.42e-11;4!UBERON:0000484;3.42e-11;4!UBERON:0000965;3.42e-11;4!UBERON:0001803;3.42e-11;4!UBERON:0001444;7.75e-09;48!UBERON:0000033;1.95e-08;50!UBERON:0002037;5.73e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,7.78e-118,3;UBERON:0001775,7.78e-118,3;UBERON:0000488,1.04e-88,4;UBERON:0002203,1.49e-59,6;UBERON:0001768,1.49e-59,6;UBERON:0002200,1.49e-59,6;UBERON:0007625,1.34e-57,11;UBERON:0001801,1.76e-45,14;UBERON:0006876,5.35e-33,11;UBERON:0000019,3.98e-32,20;UBERON:0000047,3.98e-32,20;UBERON:0010312,3.98e-32,20;UBERON:0004088,3.98e-32,20;UBERON:0010230,3.98e-32,20;UBERON:0003072,3.98e-32,20;UBERON:0004128,3.98e-32,20;UBERON:0003071,3.98e-32,20;UBERON:0000970,1.22e-30,21;UBERON:0002104,1.22e-30,21;UBERON:0001456,2.73e-29,22;UBERON:0000020,6.34e-27,24;UBERON:0001032,6.34e-27,24;UBERON:0004456,6.34e-27,24;UBERON:0005085,4.87e-21,31;UBERON:0001444,1.35e-13,49;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,5.13e-12,86;UBERON:0000033,5.51e-12,56;UBERON:0010077,3.42e-11,4;UBERON:0005389,3.42e-11,4;UBERON:0000484,3.42e-11,4;UBERON:0002546,3.42e-11,4;UBERON:0000965,3.42e-11,4;UBERON:0001803,3.42e-11,4;UBERON:0003073,3.42e-11,4;UBERON:0005426,3.42e-11,4;UBERON:0000153,6.84e-11,62;UBERON:0007811,6.84e-11,62;UBERON:0003056,6.84e-11,61;UBERON:0010371,4.61e-10,104;UBERON:0010314,4.60e-08,132;UBERON:0002037,5.92e-08,6;UBERON:0006215,5.92e-08,6;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40325341790644,1.10864698731282,1.84453049955565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,0.331737779793674,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.215649622793364,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:36052762..36052767,- | |||
}} |
Latest revision as of 15:46, 24 July 2015
Short description: | p@chr13:36052762..36052767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:36052762..36052767, - |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.78e-118 | 3 |
ciliated epithelial cell | 7.78e-118 | 3 |
multi-ciliated epithelial cell | 7.78e-118 | 3 |
non-pigmented ciliary epithelial cell | 7.78e-118 | 3 |
columnar/cuboidal epithelial cell | 4.97e-24 | 27 |
neurecto-epithelial cell | 1.34e-18 | 20 |
ecto-epithelial cell | 2.66e-11 | 34 |
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |