FFCP PHASE1:Hg19::chr13:34253614..34253667,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34253614..34253667,+ | |||
|description=CAGE_peak_at_chr13:34253614..34253667,+ | |description=CAGE_peak_at_chr13:34253614..34253667,+ | ||
|id=chr13:34253614..34253667,+ | |id=chr13:34253614..34253667,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.09e-10!140;CL:0002087!2.23e-10!119;CL:0002031!5.67e-10!124;CL:0002032!8.32e-10!165;CL:0000837!8.32e-10!165;CL:0000037!1.79e-09!172;CL:0000566!1.79e-09!172;CL:0000988!7.75e-08!182;CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | |ontology_enrichment_celltype=CL:0000738!2.09e-10!140;CL:0002087!2.23e-10!119;CL:0002031!5.67e-10!124;CL:0002032!8.32e-10!165;CL:0000837!8.32e-10!165;CL:0000037!1.79e-09!172;CL:0000566!1.79e-09!172;CL:0000988!7.75e-08!182;CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.65e-13;24!CL:0000244;4.60e-10;4!CL:0000731;4.60e-10;4 | |ontology_enrichment_celltype_v019=CL:0000945;5.65e-13;24!CL:0000244;4.60e-10;4!CL:0000731;4.60e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.89e-13,24;CL:0000826,5.89e-13,24;CL:0000244,4.48e-10,4;CL:0000731,4.48e-10,4;CL:0000542,5.48e-09,53;CL:0000051,5.48e-09,53;CL:0000838,1.16e-07,52;CL:0002087,2.29e-07,115 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.25e-09!235;DOID:14566!6.76e-09!239;DOID:0060058!4.15e-07!10 | |ontology_enrichment_disease=DOID:162!1.25e-09!235;DOID:14566!6.76e-09!239;DOID:0060058!4.15e-07!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.37e-08,235;DOID:14566,4.83e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.08e-08!115 | |ontology_enrichment_uberon=UBERON:0002405!1.08e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.94e-08;5!UBERON:0005910;7.74e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.94e-08;5!UBERON:0005910;7.74e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.85e-08,5;UBERON:0005910,7.60e-07,6 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,2.70931945184821,2.67616656466509,0,0,0.154816123316076,0,0,0,1.00707360754392,0.710846162437108,0.587200878669695,0,0.200544447470142,0,0.447830948479849,0,0,0,0,0.242584061187816,0.697287110717054,1.6446715520873,0.619412741790207,0.863077176966451,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0,0.306083892370903,0.962787081228281,0,0,0,0,1.45104619314292,1.13477044938228,1.24564449799115,0,0,0.217188844705117,0.605399502633369,1.84138817993782,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,1.55974639639243,0,0.443067789167242,0.270803863765016,1.5370958367081,1.30059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.566546713487831,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0.134710672069688,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.808987848960987,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0.93733833986777,0.503946384596579,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,2.24170287987055,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0.842516912477962,0,0,4.22600587027022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,2.58303223602738,6.73885902670502,0.886860307073351,1.1486170010348,0,0,0.569647187174163,0,0,0,0,0,0,0,0.980160863924127,2.41544127663434,0,0,0,0.199579371432817,0,1.2700414963433,0,3.08876895924805,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,1.39203086947621,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0.552567831062295,0,1.63629892003448,4.4310529965985,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0.685946781900644,0,0,0,0.580537987734511,0.292357268344742,0.246346371159628,0,0,0,1.09633539717401,0.596143835108969,0,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0,2.57392496792947,1.00838358591705,0,0,0.135904206073614,0.104602846312333,1.32597682927218,0.866851769704557,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,1.57566364614447,1.2362378757175,1.14586024552114,0.196854963029498,7.6205998859206,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.537862017998534,0.767660789277781,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0.790446527591777,0.365377795142688,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0,0.249960815924213,2.42638588066636,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0,0.477890301491107,2.24901556081802,0.621051827505038,0,1.06336685823198,0.521745061811734,0.300515217994437,0,0.406870733204662,0,0.751873899297419,0.928067519756987,0,0.400027764663154,0,0,0,0.57785949122191,0,0,1.13352962756136,0.463044948647668,0,0,0.308801447160972,0.657852148736121,0.176689145945881,0.192914038270915,0.337884881306145,0,0.690860683462397,1.21543982470953,0,0,0.797189041880179,0.327130788511688,2.94848863961771,2.45772908753719,0,1.59989916683944,0,6.02752428812855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,2.31051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0.548257766857182,0.496211178389294,0,2.42748612515231,0,0,0,0,0,6.22263532801208,1.02892805662451,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0.348724276104376,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,2.35158648180761,0,0.235676547101626,0,0,0,0.169927114687817,0.187967835959707,0,1.49911733887393,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.248298857183432,0.224263725161227,0,0,0,0,0.202056159043763,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0.603821380773079,5.44966436915496 | |phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,2.70931945184821,2.67616656466509,0,0,0.154816123316076,0,0,0,1.00707360754392,0.710846162437108,0.587200878669695,0,0.200544447470142,0,0.447830948479849,0,0,0,0,0.242584061187816,0.697287110717054,1.6446715520873,0.619412741790207,0.863077176966451,0.256160706529101,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0,0.306083892370903,0.962787081228281,0,0,0,0,1.45104619314292,1.13477044938228,1.24564449799115,0,0,0.217188844705117,0.605399502633369,1.84138817993782,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,1.55974639639243,0,0.443067789167242,0.270803863765016,1.5370958367081,1.30059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0,0,0,0.566546713487831,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0.511450247374121,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0.134710672069688,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.808987848960987,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0,1.1240175325762,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0.93733833986777,0.503946384596579,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,2.24170287987055,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0,0,0.842516912477962,0,0,4.22600587027022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,2.58303223602738,6.73885902670502,0.886860307073351,1.1486170010348,0,0,0.569647187174163,0,0,0,0,0,0,0,0.980160863924127,2.41544127663434,0,0,0,0.199579371432817,0,1.2700414963433,0,3.08876895924805,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0,0.390776190804081,1.39203086947621,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0,0,0.445234820091624,0.988823245360557,0,0,0.552567831062295,0,1.63629892003448,4.4310529965985,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0.685946781900644,0,0,0,0.580537987734511,0.292357268344742,0.246346371159628,0,0,0,1.09633539717401,0.596143835108969,0,0,0.480952921509202,0.213452994739353,0.19980960958213,0,0,2.57392496792947,1.00838358591705,0,0,0.135904206073614,0.104602846312333,1.32597682927218,0.866851769704557,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,1.57566364614447,1.2362378757175,1.14586024552114,0.196854963029498,7.6205998859206,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.537862017998534,0.767660789277781,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0.790446527591777,0.365377795142688,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0,0.573409195690071,0,0.0620964029413835,0,0.249960815924213,2.42638588066636,0,0.705797459094515,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0,0.477890301491107,2.24901556081802,0.621051827505038,0,1.06336685823198,0.521745061811734,0.300515217994437,0,0.406870733204662,0,0.751873899297419,0.928067519756987,0,0.400027764663154,0,0,0,0.57785949122191,0,0,1.13352962756136,0.463044948647668,0,0,0.308801447160972,0.657852148736121,0.176689145945881,0.192914038270915,0.337884881306145,0,0.690860683462397,1.21543982470953,0,0,0.797189041880179,0.327130788511688,2.94848863961771,2.45772908753719,0,1.59989916683944,0,6.02752428812855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75142897782519,2.31051332300676,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0.548257766857182,0.496211178389294,0,2.42748612515231,0,0,0,0,0,6.22263532801208,1.02892805662451,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0.348724276104376,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,2.35158648180761,0,0.235676547101626,0,0,0,0.169927114687817,0.187967835959707,0,1.49911733887393,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.248298857183432,0.224263725161227,0,0,0,0,0.202056159043763,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0.603821380773079,5.44966436915496 | ||
|short_description=p@chr13:34253614..34253667,+ | |short_description=p@chr13:34253614..34253667,+ | ||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34253614..34253667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34253614..34253667, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.89e-13 | 24 |
pro-B cell | 5.89e-13 | 24 |
transitional epithelial cell | 4.48e-10 | 4 |
urothelial cell | 4.48e-10 | 4 |
lymphocyte | 5.48e-09 | 53 |
common lymphoid progenitor | 5.48e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.16e-07 | 52 |
nongranular leukocyte | 2.29e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.85e-08 | 5 |
transitional epithelium | 7.60e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.37e-08 | 235 |
disease of cellular proliferation | 4.83e-08 | 239 |