FFCP PHASE1:Hg19::chr13:33002636..33002647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:33002636..33002647,+ | |||
|coexpression_cluster_id=C520 | |coexpression_cluster_id=C520 | ||
|description=CAGE_peak_at_chr13:33002636..33002647,+ | |description=CAGE_peak_at_chr13:33002636..33002647,+ | ||
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|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-38,42;CL:0002057,3.08e-38,42;CL:0000623,2.98e-36,3;CL:0000825,2.98e-36,3;CL:0000473,2.78e-33,48;CL:0000234,2.78e-33,48;CL:0002087,3.33e-27,115;CL:0002194,2.46e-26,59;CL:0000576,2.46e-26,59;CL:0000040,2.46e-26,59;CL:0000559,2.46e-26,59;CL:0002031,5.28e-26,120;CL:0002009,1.94e-25,61;CL:0000839,1.98e-23,66;CL:0000557,4.60e-23,67;CL:0000738,9.52e-23,136;CL:0000766,2.22e-21,72;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000763,8.36e-14,108;CL:0000049,8.36e-14,108;CL:0002393,2.71e-12,9;CL:0002397,2.71e-12,9;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-24;42 | |ontology_enrichment_development_v019=CL:0002057;1.62e-24;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.70e-30!80;UBERON:0001474!9.34e-28!86;UBERON:0002390!3.71e-25!102;UBERON:0003061!3.71e-25!102;UBERON:0002193!1.57e-23!112;UBERON:0004765!2.46e-22!101;UBERON:0001434!2.46e-22!101;UBERON:0002405!3.29e-21!115;UBERON:0002384!7.07e-17!375;UBERON:0002204!3.47e-10!167;UBERON:0003081!5.58e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!1.70e-30!80;UBERON:0001474!9.34e-28!86;UBERON:0002390!3.71e-25!102;UBERON:0003061!3.71e-25!102;UBERON:0002193!1.57e-23!112;UBERON:0004765!2.46e-22!101;UBERON:0001434!2.46e-22!101;UBERON:0002405!3.29e-21!115;UBERON:0002384!7.07e-17!375;UBERON:0002204!3.47e-10!167;UBERON:0003081!5.58e-08!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.43e-20,76;UBERON:0001474,1.28e-18,82;UBERON:0004765,7.57e-17,90;UBERON:0002405,2.93e-16,93;UBERON:0002390,2.33e-15,98;UBERON:0003061,2.33e-15,98;UBERON:0001434,5.04e-15,100;UBERON:0002193,8.36e-14,108;UBERON:0002204,2.23e-08,167;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p@chr13:33002636..33002647,+ | |short_description=p@chr13:33002636..33002647,+ | ||
}} | }} |
Latest revision as of 15:41, 24 July 2015
Short description: | p@chr13:33002636..33002647, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:33002636..33002647, + |
Coexpression cluster: | C520_Natural_CD14_CD8_Basophils_CD4_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-38 | 42 |
natural killer cell | 2.98e-36 | 3 |
pro-NK cell | 2.98e-36 | 3 |
defensive cell | 2.78e-33 | 48 |
phagocyte | 2.78e-33 | 48 |
nongranular leukocyte | 3.33e-27 | 115 |
monopoietic cell | 2.46e-26 | 59 |
monocyte | 2.46e-26 | 59 |
monoblast | 2.46e-26 | 59 |
promonocyte | 2.46e-26 | 59 |
hematopoietic lineage restricted progenitor cell | 5.28e-26 | 120 |
macrophage dendritic cell progenitor | 1.94e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-23 | 66 |
granulocyte monocyte progenitor cell | 4.60e-23 | 67 |
leukocyte | 9.52e-23 | 136 |
myeloid leukocyte | 2.22e-21 | 72 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
myeloid cell | 8.36e-14 | 108 |
common myeloid progenitor | 8.36e-14 | 108 |
intermediate monocyte | 2.71e-12 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-12 | 9 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.43e-20 | 76 |
bone element | 1.28e-18 | 82 |
skeletal element | 7.57e-17 | 90 |
immune system | 2.93e-16 | 93 |
hematopoietic system | 2.33e-15 | 98 |
blood island | 2.33e-15 | 98 |
skeletal system | 5.04e-15 | 100 |
hemolymphoid system | 8.36e-14 | 108 |
musculoskeletal system | 2.23e-08 | 167 |
connective tissue | 4.69e-07 | 371 |