FFCP PHASE1:Hg19::chr13:24826449..24826457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:24826449..24826457,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr13:24826449..24826457,- | |||
|id=chr13:24826449..24826457,- | |||
|ontology_enrichment_celltype=CL:0002087!7.92e-19!119;CL:0000738!4.91e-18!140;CL:0002031!8.03e-18!124;CL:0000791!3.10e-15!18;CL:0000789!3.10e-15!18;CL:0002420!3.10e-15!18;CL:0002419!3.10e-15!18;CL:0000790!3.10e-15!18;CL:0000623!8.62e-15!3;CL:0000825!8.62e-15!3;CL:0000037!1.75e-13!172;CL:0000566!1.75e-13!172;CL:0000084!1.99e-13!25;CL:0000827!1.99e-13!25;CL:0002032!4.74e-13!165;CL:0000837!4.74e-13!165;CL:0000624!1.62e-12!6;CL:0000988!2.16e-12!182;CL:0000838!2.85e-10!52;CL:0002057!3.53e-10!42;CL:0000542!4.98e-10!53;CL:0000051!4.98e-10!53;CL:0002009!1.27e-09!65;CL:0000860!2.34e-09!45;CL:0000557!1.42e-08!71;CL:0002194!1.77e-08!63;CL:0000576!1.77e-08!63;CL:0000040!1.77e-08!63;CL:0000559!1.77e-08!63;CL:0002393!7.11e-08!9;CL:0002397!7.11e-08!9;CL:0000766!9.23e-08!76;CL:0000839!2.19e-07!70;CL:0000625!6.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.04e-54;3!CL:0000791;2.66e-48;18!CL:0000789;2.66e-48;18!CL:0002419;2.66e-48;18!CL:0000084;2.28e-45;25!CL:0000624;1.85e-27;6!CL:0000625;1.79e-26;11!CL:0000542;1.87e-21;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.04e-54,3;CL:0000825,1.04e-54,3;CL:0000791,2.57e-48,18;CL:0000789,2.57e-48,18;CL:0002420,2.57e-48,18;CL:0002419,2.57e-48,18;CL:0000790,2.57e-48,18;CL:0000084,2.28e-45,25;CL:0000827,2.28e-45,25;CL:0000838,3.95e-41,52;CL:0000542,2.40e-40,53;CL:0000051,2.40e-40,53;CL:0000624,2.12e-27,6;CL:0000625,1.57e-26,11;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.66e-48;18!CL:0000051;1.87e-21;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;1.42e-19;1!DOID:0060061;1.42e-19;1!DOID:8691;1.42e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.56e-19,1;DOID:0060061,1.56e-19,1;DOID:8691,1.56e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.64e-07!80;UBERON:0002390!4.28e-07!102;UBERON:0003061!4.28e-07!102;UBERON:0002193!4.35e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr13:24826449..24826457,- | |||
}} | }} |
Latest revision as of 15:10, 24 July 2015
Short description: | p@chr13:24826449..24826457, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24826449..24826457, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.04e-54 | 3 |
pro-NK cell | 1.04e-54 | 3 |
mature alpha-beta T cell | 2.57e-48 | 18 |
alpha-beta T cell | 2.57e-48 | 18 |
immature T cell | 2.57e-48 | 18 |
mature T cell | 2.57e-48 | 18 |
immature alpha-beta T cell | 2.57e-48 | 18 |
T cell | 2.28e-45 | 25 |
pro-T cell | 2.28e-45 | 25 |
lymphoid lineage restricted progenitor cell | 3.95e-41 | 52 |
lymphocyte | 2.40e-40 | 53 |
common lymphoid progenitor | 2.40e-40 | 53 |
CD4-positive, alpha-beta T cell | 2.12e-27 | 6 |
CD8-positive, alpha-beta T cell | 1.57e-26 | 11 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.56e-19 | 1 |
cutaneous T cell lymphoma | 1.56e-19 | 1 |
mycosis fungoides | 1.56e-19 | 1 |