FFCP PHASE1:Hg19::chr13:24528588..24528596,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:24528588..24528596,+ | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr13:24528588..24528596,+ | |description=CAGE_peak_at_chr13:24528588..24528596,+ | ||
|id=chr13:24528588..24528596,+ | |id=chr13:24528588..24528596,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.84e-11;31!UBERON:0003918;1.47e-09;10!UBERON:0007687;1.47e-09;10 | |||
|ontology_enrichment_disease=DOID:162!1.08e-08!235;DOID:14566!2.74e-08!239;DOID:0050687!1.60e-07!143 | |ontology_enrichment_disease=DOID:162!1.08e-08!235;DOID:14566!2.74e-08!239;DOID:0050687!1.60e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.97e-13;7!DOID:3904;1.97e-13;7!DOID:6193;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,1.53e-13,7;DOID:3904,1.53e-13,7;DOID:6193,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000956!1.22e-12!25;UBERON:0000203!1.22e-12!25;UBERON:0002619!1.37e-12!22;UBERON:0001869!2.86e-12!32;UBERON:0000349!3.40e-12!5;UBERON:0002020!2.01e-11!34;UBERON:0003528!2.01e-11!34;UBERON:0001893!2.37e-11!34;UBERON:0002791!2.68e-10!33;UBERON:0001950!2.04e-09!20;UBERON:0002780!7.57e-09!41;UBERON:0001890!7.57e-09!41;UBERON:0006240!7.57e-09!41;UBERON:0003080!1.47e-08!42 | |ontology_enrichment_uberon=UBERON:0000956!1.22e-12!25;UBERON:0000203!1.22e-12!25;UBERON:0002619!1.37e-12!22;UBERON:0001869!2.86e-12!32;UBERON:0000349!3.40e-12!5;UBERON:0002020!2.01e-11!34;UBERON:0003528!2.01e-11!34;UBERON:0001893!2.37e-11!34;UBERON:0002791!2.68e-10!33;UBERON:0001950!2.04e-09!20;UBERON:0002780!7.57e-09!41;UBERON:0001890!7.57e-09!41;UBERON:0006240!7.57e-09!41;UBERON:0003080!1.47e-08!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001954;4.94e-21;2!UBERON:0003022;4.94e-21;2!UBERON:0002421;4.94e-21;2!UBERON:0002600;4.94e-21;2!UBERON:0000349;9.98e-19;5!UBERON:0001282;3.81e-11;1!UBERON:0009842;3.81e-11;1!UBERON:0003704;3.81e-11;1!UBERON:0001171;3.81e-11;1!UBERON:0001172;3.81e-11;1!UBERON:0001052;9.41e-11;4!UBERON:0004907;8.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,6.37e-21,2;UBERON:0003022,6.37e-21,2;UBERON:0002421,6.37e-21,2;UBERON:0002600,6.37e-21,2;UBERON:0000349,1.16e-18,5;UBERON:0001282,5.43e-11,1;UBERON:0009842,5.43e-11,1;UBERON:0003704,5.43e-11,1;UBERON:0001171,5.43e-11,1;UBERON:0001172,5.43e-11,1;UBERON:0001052,9.42e-11,4;UBERON:0004907,8.84e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23437948524618,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,49.5794618070894,1.41832609060762,0,0,0,0,0,0,0,0,0.438770794307945,0,0.278847488557207,0,1.13942055847001,0.23056390438806,0.897576444097721,0.108647371922008,0,0,0,0,0,0,1.35357396370308,0.588187602953219,1.34257269580674,0,0,0,0,1.27217764290547,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,1.05226393590145,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0,81.3493933590746,0,0,0,0,0,0,29.6010557236982,0,0.253243183823515,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,18.290282865614,1.22583065500418,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0.138314504928436,0.322951291263702,0,0.687034029507179,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,1.40136081656895,0,2.37520350340484,0,0,0.316027223465453,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0.294450700845729,0,0,0,0,0,0.233939463462106,0,0,1.80713731262336,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,9.92700946658936,14.2020988982775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23437948524618,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,49.5794618070894,1.41832609060762,0,0,0,0,0,0,0,0,0.438770794307945,0,0.278847488557207,0,1.13942055847001,0.23056390438806,0.897576444097721,0.108647371922008,0,0,0,0,0,0,1.35357396370308,0.588187602953219,1.34257269580674,0,0,0,0,1.27217764290547,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,1.05226393590145,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0,81.3493933590746,0,0,0,0,0,0,29.6010557236982,0,0.253243183823515,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,18.290282865614,1.22583065500418,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0.138314504928436,0.322951291263702,0,0.687034029507179,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,1.40136081656895,0,2.37520350340484,0,0,0.316027223465453,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0,0.294450700845729,0,0,0,0,0,0.233939463462106,0,0,1.80713731262336,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,9.92700946658936,14.2020988982775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr13:24528588..24528596,+ | |short_description=p@chr13:24528588..24528596,+ | ||
}} | }} |
Latest revision as of 15:09, 24 July 2015
Short description: | p@chr13:24528588..24528596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24528588..24528596, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 6.37e-21 | 2 |
lobe parts of cerebral cortex | 6.37e-21 | 2 |
hippocampal formation | 6.37e-21 | 2 |
limbic lobe | 6.37e-21 | 2 |
limbic system | 1.16e-18 | 5 |
intralobular bile duct | 5.43e-11 | 1 |
acinus | 5.43e-11 | 1 |
intrahepatic bile duct | 5.43e-11 | 1 |
portal lobule | 5.43e-11 | 1 |
hepatic acinus | 5.43e-11 | 1 |
rectum | 9.42e-11 | 4 |
lower digestive tract | 8.84e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.53e-13 | 7 |
bronchogenic carcinoma | 1.53e-13 | 7 |
epithelioid sarcoma | 8.62e-12 | 1 |