FFCP PHASE1:Hg19::chr13:114781050..114781058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114781050..114781058,- | |||
|coexpression_cluster_id=C1378 | |coexpression_cluster_id=C1378 | ||
|description=CAGE_peak_at_chr13:114781050..114781058,- | |description=CAGE_peak_at_chr13:114781050..114781058,- | ||
|id=chr13:114781050..114781058,- | |id=chr13:114781050..114781058,- | ||
|ontology_enrichment_celltype=CL:0000136!1.90e-23!15;CL:0000325!1.88e-09!39;CL:0002617!1.93e-08!2;CL:1000415!1.78e-07!2 | |ontology_enrichment_celltype=CL:0000136!1.90e-23!15;CL:0000325!1.88e-09!39;CL:0002617!1.93e-08!2;CL:1000415!1.78e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.31e-42;13!CL:0002521;1.26e-08;3!CL:0002567;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.32e-37,15;CL:0002567,1.04e-08,3;CL:0002521,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.02e-23;4!UBERON:0007284;8.02e-23;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.10e-18!9;UBERON:0003688!7.22e-10!6;UBERON:0002358!7.22e-10!6;UBERON:0003684!7.22e-10!6;UBERON:0001178!7.22e-10!6;UBERON:0001557!2.63e-08!19;UBERON:0002294!8.23e-08!7;UBERON:0001173!8.23e-08!7;UBERON:0004912!8.23e-08!7 | |ontology_enrichment_uberon=UBERON:0001737!1.10e-18!9;UBERON:0003688!7.22e-10!6;UBERON:0002358!7.22e-10!6;UBERON:0003684!7.22e-10!6;UBERON:0001178!7.22e-10!6;UBERON:0001557!2.63e-08!19;UBERON:0002294!8.23e-08!7;UBERON:0001173!8.23e-08!7;UBERON:0004912!8.23e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.83e-30;3!UBERON:0000946;4.83e-30;3!UBERON:0002146;3.67e-23;1!UBERON:0002134;3.67e-23;1!UBERON:0005208;3.67e-23;1!UBERON:0005623;3.67e-23;1!UBERON:0004145;3.67e-23;1!UBERON:0005946;3.67e-23;1!UBERON:0005965;3.67e-23;1!UBERON:0002078;3.67e-23;1!UBERON:0002081;2.74e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0010313;9.65e-10;10!UBERON:0004151;1.26e-08;3!UBERON:0002190;1.26e-08;3!UBERON:0001013;2.85e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,7.54e-30,3;UBERON:0009751,7.54e-30,3;UBERON:0000946,7.54e-30,3;UBERON:0002523,7.54e-30,3;UBERON:0005983,7.54e-30,3;UBERON:0002165,7.54e-30,3;UBERON:0002062,7.54e-30,3;UBERON:0007280,7.54e-30,3;UBERON:0002134,4.10e-23,1;UBERON:0005208,4.10e-23,1;UBERON:0005946,4.10e-23,1;UBERON:0005965,4.10e-23,1;UBERON:0002078,4.10e-23,1;UBERON:0002146,6.40e-23,1;UBERON:0005623,6.40e-23,1;UBERON:0004797,2.04e-13,7;UBERON:0002081,2.90e-12,2;UBERON:0002133,2.90e-12,2;UBERON:0010227,2.90e-12,2;UBERON:0010313,1.10e-09,10;UBERON:0002342,1.10e-09,10;UBERON:0005062,1.10e-09,10;UBERON:0002190,1.21e-08,3;UBERON:0004151,1.30e-08,3;UBERON:0004145,1.30e-08,3;UBERON:0001013,2.85e-07,14 | |||
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| ||
|short_description=p@chr13:114781050..114781058,- | |short_description=p@chr13:114781050..114781058,- | ||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114781050..114781058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114781050..114781058, - |
Coexpression cluster: | C1378_Mesenchymal_mature_Adipocyte_testicular_choriocarcinoma_chorionic_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.32e-37 | 15 |
light melanocyte | 1.04e-08 | 3 |
subcutaneous fat cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 7.54e-30 | 3 |
cardiac mesenchyme | 7.54e-30 | 3 |
cardial valve | 7.54e-30 | 3 |
tunica intima | 7.54e-30 | 3 |
heart layer | 7.54e-30 | 3 |
endocardium | 7.54e-30 | 3 |
endocardial cushion | 7.54e-30 | 3 |
presumptive endocardium | 7.54e-30 | 3 |
tricuspid valve | 4.10e-23 | 1 |
right atrium valve | 4.10e-23 | 1 |
outflow tract of atrium | 4.10e-23 | 1 |
outflow part of right atrium | 4.10e-23 | 1 |
right cardiac atrium | 4.10e-23 | 1 |
pulmonary valve | 6.40e-23 | 1 |
semi-lunar valve | 6.40e-23 | 1 |
blood vessel layer | 2.04e-13 | 7 |
cardiac atrium | 2.90e-12 | 2 |
atrioventricular valve | 2.90e-12 | 2 |
future cardiac atrium | 2.90e-12 | 2 |
neural crest-derived structure | 1.10e-09 | 10 |
neural crest | 1.10e-09 | 10 |
neural fold | 1.10e-09 | 10 |
subcutaneous adipose tissue | 1.21e-08 | 3 |
cardiac chamber | 1.30e-08 | 3 |
outflow tract | 1.30e-08 | 3 |
adipose tissue | 2.85e-07 | 14 |