FFCP PHASE1:Hg19::chr13:113952039..113952084,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:113952039..113952084,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr13:113952039..113952084,- | |description=CAGE_peak_at_chr13:113952039..113952084,- | ||
|id=chr13:113952039..113952084,- | |id=chr13:113952039..113952084,- | ||
|ontology_enrichment_celltype=CL:0000738!1.62e-61!140;CL:0000037!5.72e-53!172;CL:0000566!5.72e-53!172;CL:0000988!3.46e-52!182;CL:0002032!4.82e-45!165;CL:0000837!4.82e-45!165;CL:0002031!4.94e-44!124;CL:0002087!3.42e-43!119;CL:0000766!1.25e-27!76;CL:0000763!7.17e-25!112;CL:0000049!7.17e-25!112;CL:0000557!2.34e-24!71;CL:0002057!4.61e-23!42;CL:0002009!4.48e-22!65;CL:0000839!1.47e-21!70;CL:0000860!4.89e-21!45;CL:0002194!9.29e-20!63;CL:0000576!9.29e-20!63;CL:0000040!9.29e-20!63;CL:0000559!9.29e-20!63;CL:0000838!5.09e-19!52;CL:0000542!1.61e-18!53;CL:0000051!1.61e-18!53;CL:0000791!1.13e-17!18;CL:0000789!1.13e-17!18;CL:0002420!1.13e-17!18;CL:0002419!1.13e-17!18;CL:0000790!1.13e-17!18;CL:0000134!2.25e-16!358;CL:0000451!3.38e-16!10;CL:0002320!1.12e-15!365;CL:0000084!1.27e-15!25;CL:0000827!1.27e-15!25;CL:0002393!6.01e-14!9;CL:0002397!6.01e-14!9;CL:0000219!3.05e-13!390;CL:0000990!1.90e-12!8;CL:0000048!4.58e-12!430;CL:0000034!1.02e-11!444;CL:0000723!1.26e-11!436;CL:0000625!4.27e-11!11;CL:0000624!1.18e-09!6;CL:0000453!2.07e-09!5;CL:0000080!7.17e-09!6;CL:0000623!4.08e-08!3;CL:0000825!4.08e-08!3;CL:0000840!4.60e-08!5;CL:0001029!4.60e-08!5;CL:0000767!1.01e-07!3;CL:0000842!1.34e-07!3;CL:0000784!1.43e-07!3;CL:0000094!6.98e-07!8;CL:0000081!9.08e-07!11 | |ontology_enrichment_celltype=CL:0000738!1.62e-61!140;CL:0000037!5.72e-53!172;CL:0000566!5.72e-53!172;CL:0000988!3.46e-52!182;CL:0002032!4.82e-45!165;CL:0000837!4.82e-45!165;CL:0002031!4.94e-44!124;CL:0002087!3.42e-43!119;CL:0000766!1.25e-27!76;CL:0000763!7.17e-25!112;CL:0000049!7.17e-25!112;CL:0000557!2.34e-24!71;CL:0002057!4.61e-23!42;CL:0002009!4.48e-22!65;CL:0000839!1.47e-21!70;CL:0000860!4.89e-21!45;CL:0002194!9.29e-20!63;CL:0000576!9.29e-20!63;CL:0000040!9.29e-20!63;CL:0000559!9.29e-20!63;CL:0000838!5.09e-19!52;CL:0000542!1.61e-18!53;CL:0000051!1.61e-18!53;CL:0000791!1.13e-17!18;CL:0000789!1.13e-17!18;CL:0002420!1.13e-17!18;CL:0002419!1.13e-17!18;CL:0000790!1.13e-17!18;CL:0000134!2.25e-16!358;CL:0000451!3.38e-16!10;CL:0002320!1.12e-15!365;CL:0000084!1.27e-15!25;CL:0000827!1.27e-15!25;CL:0002393!6.01e-14!9;CL:0002397!6.01e-14!9;CL:0000219!3.05e-13!390;CL:0000990!1.90e-12!8;CL:0000048!4.58e-12!430;CL:0000034!1.02e-11!444;CL:0000723!1.26e-11!436;CL:0000625!4.27e-11!11;CL:0000624!1.18e-09!6;CL:0000453!2.07e-09!5;CL:0000080!7.17e-09!6;CL:0000623!4.08e-08!3;CL:0000825!4.08e-08!3;CL:0000840!4.60e-08!5;CL:0001029!4.60e-08!5;CL:0000767!1.01e-07!3;CL:0000842!1.34e-07!3;CL:0000784!1.43e-07!3;CL:0000094!6.98e-07!8;CL:0000081!9.08e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.09e-24;18!CL:0000789;1.09e-24;18!CL:0002419;1.09e-24;18!CL:0000624;7.27e-24;6!CL:0000623;4.49e-19;3!CL:0000767;5.03e-18;3!CL:0000226;1.23e-17;3!CL:0000842;1.23e-17;3!CL:0000784;1.74e-17;3!CL:0000084;2.33e-17;25!CL:0000542;6.70e-16;53!CL:0002393;2.39e-09;6!CL:0002397;2.39e-09;6!CL:0002087;3.42e-09;104!CL:0000625;8.82e-09;11!CL:0000898;1.68e-08;3!CL:0000236;1.81e-07;13!CL:0000895;3.50e-07;1!CL:0000094;4.66e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.62e-37,136;CL:0002087,6.44e-31,115;CL:0000037,3.94e-29,168;CL:0000988,2.33e-27,177;CL:0000838,1.33e-25,52;CL:0000542,4.71e-25,53;CL:0000051,4.71e-25,53;CL:0000791,1.02e-24,18;CL:0000789,1.02e-24,18;CL:0002420,1.02e-24,18;CL:0002419,1.02e-24,18;CL:0000790,1.02e-24,18;CL:0000624,6.93e-24,6;CL:0002031,1.44e-22,120;CL:0002032,1.22e-20,161;CL:0000837,1.22e-20,161;CL:0000623,4.49e-19,3;CL:0000825,4.49e-19,3;CL:0000767,5.04e-18,3;CL:0000226,1.07e-17,3;CL:0000842,1.07e-17,3;CL:0000784,1.27e-17,3;CL:0000084,2.22e-17,25;CL:0000827,2.22e-17,25;CL:0000134,1.08e-10,354;CL:0002320,2.29e-10,361;CL:0000219,3.24e-09,386;CL:0000625,8.55e-09,11;CL:0000898,1.68e-08,3;CL:0000034,3.61e-08,441;CL:0000048,8.35e-08,427;CL:0000723,1.31e-07,433;CL:0000766,2.54e-07,72;CL:0000810,3.82e-07,1;CL:0000895,3.82e-07,1;CL:0002436,3.82e-07,1;CL:0002427,3.82e-07,1;CL:0002428,3.82e-07,1;CL:0002429,3.82e-07,1;CL:0002433,3.82e-07,1;CL:0002431,3.82e-07,1;CL:0002432,3.82e-07,1;CL:0000094,4.66e-07,8;CL:0000236,5.99e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-24;18!CL:0000051;6.70e-16;53!CL:0002427;3.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.72e-24!102;UBERON:0003061!2.72e-24!102;UBERON:0002371!4.82e-22!80;UBERON:0002193!4.69e-21!112;UBERON:0001474!8.23e-20!86;UBERON:0004765!2.03e-15!101;UBERON:0001434!2.03e-15!101;UBERON:0002384!9.85e-15!375;UBERON:0002405!2.40e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.38e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,6.68719270643137,2.30297638858328,2.32224184974114,0,0,0,0,0,0.587200878669695,2.21598163412751,4.41197784434312,5.64228263861215,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,1.08594422352558,0,0.368277635987565,0,0.422510572623884,0.637812899895131,0.419317291016752,1.01095768031846,0,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,1.70692089026603,0,0,0,0,10.2458334439701,9.98303221930596,7.26319133437935,0,3.36305137788922,0,3.73748563216283,5.10913991573914,2.46721798799411,0.501559486172034,1.62961133316795,2.8406868344084,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.384273959177026,0.780356085359269,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.339928028092699,3.06576394881537,1.37450978193052,0.506039384039006,0.637130828648193,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,7.66105624253983,12.0348088102578,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,2.8618874916641,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,7.48716888767323,13.1532820664306,11.9359023740166,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,3.8828556147351,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,6.68719270643137,2.30297638858328,2.32224184974114,0,0,0,0,0,0.587200878669695,2.21598163412751,4.41197784434312,5.64228263861215,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0.575384784644301,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,1.0429658368404,1.08594422352558,0,0.368277635987565,0,0.422510572623884,0.637812899895131,0.419317291016752,1.01095768031846,0,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,1.70692089026603,0,0,0,0,10.2458334439701,9.98303221930596,7.26319133437935,0,3.36305137788922,0,3.73748563216283,5.10913991573914,2.46721798799411,0.501559486172034,1.62961133316795,2.8406868344084,0,0.334231370655521,0,0.443067789167242,0.270803863765016,0.384273959177026,0.780356085359269,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0.339928028092699,3.06576394881537,1.37450978193052,0.506039384039006,0.637130828648193,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,7.66105624253983,12.0348088102578,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,2.8618874916641,2.28797964312051,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,7.48716888767323,13.1532820664306,11.9359023740166,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,3.8828556147351,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:113952039..113952084,- | |short_description=p@chr13:113952039..113952084,- | ||
}} | }} |
Latest revision as of 14:46, 24 July 2015
Short description: | p@chr13:113952039..113952084, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:113952039..113952084, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.38e-10 | 371 |