FFCP PHASE1:Hg19::chr13:113851467..113851493,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:113851467..113851493,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr13:113851467..113851493,- | |description=CAGE_peak_at_chr13:113851467..113851493,- | ||
|id=chr13:113851467..113851493,- | |id=chr13:113851467..113851493,- | ||
|ontology_enrichment_celltype=CL:0002596;2.74e-12;2!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002596;2.74e-12;2!CL:0000346;1.26e-08;3!CL:1000428;1.26e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002596,2.07e-12,2;CL:0000346,1.12e-08,3;CL:1000428,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0005396;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0001003;8.58e-07;15!UBERON:0007376;8.58e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0000412;1.26e-08;3!UBERON:0001992;1.26e-08;3!UBERON:0001003;8.58e-07;15!UBERON:0007376;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,2.07e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003135,4.08e-09,11;UBERON:0000412,1.12e-08,3;UBERON:0001992,1.12e-08,3;UBERON:0001003,8.33e-07,15;UBERON:0007376,8.33e-07,15;UBERON:0007383,8.33e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,3.01251873644739,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.370691816839509,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0,0,15.3830757383026,5.62724673327975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,3.01251873644739,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,1.56989728039846,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0,0,0,0,0,1.18608451472249,0.370691816839509,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0.343189995723929,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0,0,15.3830757383026,5.62724673327975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr13:113851467..113851493,- | |short_description=p@chr13:113851467..113851493,- | ||
}} | }} |
Latest revision as of 14:45, 24 July 2015
Short description: | p@chr13:113851467..113851493, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:113851467..113851493, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 2.07e-12 | 2 |
hair follicle dermal papilla cell | 1.12e-08 | 3 |
stem cell of epidermis | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 2.07e-12 | 2 |
testis | 3.54e-12 | 8 |
male reproductive organ | 4.08e-09 | 11 |
dermal papilla | 1.12e-08 | 3 |
papillary layer of dermis | 1.12e-08 | 3 |
skin epidermis | 8.33e-07 | 15 |
outer epithelium | 8.33e-07 | 15 |
enveloping layer of ectoderm | 8.33e-07 | 15 |