FFCP PHASE1:Hg19::chr13:111566548..111566562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111566548..111566562,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr13:111566548..111566562,- | |description=CAGE_peak_at_chr13:111566548..111566562,- | ||
|id=chr13:111566548..111566562,- | |id=chr13:111566548..111566562,- | ||
|ontology_enrichment_celltype=CL:0000738!4.26e-41!140;CL:0002057!1.37e-36!42;CL:0000860!2.66e-33!45;CL:0000988!4.49e-31!182;CL:0000037!5.26e-31!172;CL:0000566!5.26e-31!172;CL:0000766!8.85e-29!76;CL:0002087!1.70e-28!119;CL:0002031!5.29e-28!124;CL:0002032!2.76e-27!165;CL:0000837!2.76e-27!165;CL:0000557!8.44e-25!71;CL:0002009!2.49e-23!65;CL:0000839!2.76e-22!70;CL:0002194!2.54e-21!63;CL:0000576!2.54e-21!63;CL:0000040!2.54e-21!63;CL:0000559!2.54e-21!63;CL:0000763!5.65e-21!112;CL:0000049!5.65e-21!112;CL:0002393!7.19e-11!9;CL:0002397!7.19e-11!9;CL:0000080!1.54e-08!6;CL:0000134!1.94e-08!358;CL:0002320!7.05e-08!365;CL:0000453!1.01e-07!5;CL:0000094!3.20e-07!8 | |ontology_enrichment_celltype=CL:0000738!4.26e-41!140;CL:0002057!1.37e-36!42;CL:0000860!2.66e-33!45;CL:0000988!4.49e-31!182;CL:0000037!5.26e-31!172;CL:0000566!5.26e-31!172;CL:0000766!8.85e-29!76;CL:0002087!1.70e-28!119;CL:0002031!5.29e-28!124;CL:0002032!2.76e-27!165;CL:0000837!2.76e-27!165;CL:0000557!8.44e-25!71;CL:0002009!2.49e-23!65;CL:0000839!2.76e-22!70;CL:0002194!2.54e-21!63;CL:0000576!2.54e-21!63;CL:0000040!2.54e-21!63;CL:0000559!2.54e-21!63;CL:0000763!5.65e-21!112;CL:0000049!5.65e-21!112;CL:0002393!7.19e-11!9;CL:0002397!7.19e-11!9;CL:0000080!1.54e-08!6;CL:0000134!1.94e-08!358;CL:0002320!7.05e-08!365;CL:0000453!1.01e-07!5;CL:0000094!3.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.03e-36;33!CL:0002057;8.03e-36;33!CL:0002393;3.90e-30;6!CL:0002397;3.90e-30;6!CL:0000576;3.84e-28;48!CL:0000766;4.32e-27;69!CL:0000473;2.74e-25;39!CL:0000234;2.74e-25;39!CL:0000094;2.02e-15;8!CL:0002087;6.26e-14;104!CL:0000763;3.15e-12;100!CL:0000738;1.67e-11;136!CL:0000081;3.78e-11;11!CL:0000775;7.25e-08;3!CL:0000226;2.84e-07;3!CL:0000767;2.84e-07;3!CL:0000784;2.84e-07;3!CL:0000842;2.84e-07;3!CL:0000451;3.50e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.34e-59,72;CL:0000860,2.98e-58,42;CL:0002057,2.98e-58,42;CL:0000738,1.70e-50,136;CL:0000473,2.62e-50,48;CL:0000234,2.62e-50,48;CL:0000557,1.23e-47,67;CL:0002009,5.22e-45,61;CL:0000839,1.19e-44,66;CL:0000763,5.23e-43,108;CL:0000049,5.23e-43,108;CL:0002194,8.53e-43,59;CL:0000576,8.53e-43,59;CL:0000040,8.53e-43,59;CL:0000559,8.53e-43,59;CL:0000037,1.49e-39,168;CL:0000988,3.51e-37,177;CL:0002032,1.06e-34,161;CL:0000837,1.06e-34,161;CL:0002031,8.64e-33,120;CL:0002087,4.76e-32,115;CL:0002393,3.21e-20,9;CL:0002397,3.21e-20,9;CL:0000094,2.32e-15,8;CL:0000134,6.64e-15,354;CL:0002320,1.81e-14,361;CL:0000219,6.24e-13,386;CL:0000034,2.25e-11,441;CL:0000081,4.17e-11,11;CL:0000048,4.77e-11,427;CL:0000723,8.68e-11,433;CL:0000775,6.90e-08,3;CL:0000226,2.20e-07,3;CL:0000842,2.20e-07,3;CL:0000784,2.59e-07,3;CL:0000767,3.45e-07,3;CL:0000451,3.68e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-39;42!CL:0000049;1.75e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.44e-26!112;UBERON:0002390!1.06e-25!102;UBERON:0003061!1.06e-25!102;UBERON:0002371!6.16e-23!80;UBERON:0001474!2.24e-20!86;UBERON:0002405!2.27e-19!115;UBERON:0004765!3.01e-16!101;UBERON:0001434!3.01e-16!101;UBERON:0002384!1.70e-07!375;UBERON:0003081!3.72e-07!216 | |ontology_enrichment_uberon=UBERON:0002193!2.44e-26!112;UBERON:0002390!1.06e-25!102;UBERON:0003061!1.06e-25!102;UBERON:0002371!6.16e-23!80;UBERON:0001474!2.24e-20!86;UBERON:0002405!2.27e-19!115;UBERON:0004765!3.01e-16!101;UBERON:0001434!3.01e-16!101;UBERON:0002384!1.70e-07!375;UBERON:0003081!3.72e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-41,76;UBERON:0001474,6.17e-38,82;UBERON:0002390,4.46e-36,98;UBERON:0003061,4.46e-36,98;UBERON:0004765,4.55e-34,90;UBERON:0002405,8.69e-33,93;UBERON:0002193,3.50e-32,108;UBERON:0001434,4.28e-30,100;UBERON:0002204,1.10e-15,167;UBERON:0003081,3.17e-14,203;UBERON:0002384,7.13e-14,371;UBERON:0000926,5.70e-07,315;UBERON:0004120,5.70e-07,315;UBERON:0006603,5.70e-07,315 | |||
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| ||
|short_description=p@chr13:111566548..111566562,- | |short_description=p@chr13:111566548..111566562,- | ||
}} | }} |
Latest revision as of 14:35, 24 July 2015
Short description: | p@chr13:111566548..111566562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111566548..111566562, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-41 | 76 |
bone element | 6.17e-38 | 82 |
hematopoietic system | 4.46e-36 | 98 |
blood island | 4.46e-36 | 98 |
skeletal element | 4.55e-34 | 90 |
immune system | 8.69e-33 | 93 |
hemolymphoid system | 3.50e-32 | 108 |
skeletal system | 4.28e-30 | 100 |
musculoskeletal system | 1.10e-15 | 167 |
lateral plate mesoderm | 3.17e-14 | 203 |
connective tissue | 7.13e-14 | 371 |
mesoderm | 5.70e-07 | 315 |
mesoderm-derived structure | 5.70e-07 | 315 |
presumptive mesoderm | 5.70e-07 | 315 |