FFCP PHASE1:Hg19::chr13:110354471..110354477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110354471..110354477,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr13:110354471..110354477,- | |description=CAGE_peak_at_chr13:110354471..110354477,- | ||
|id=chr13:110354471..110354477,- | |id=chr13:110354471..110354477,- | ||
|ontology_enrichment_celltype=CL:0002057!2.77e-55!42;CL:0000860!3.84e-51!45;CL:0000839!5.41e-35!70;CL:0000557!2.09e-34!71;CL:0000766!3.05e-34!76;CL:0002194!6.19e-34!63;CL:0000576!6.19e-34!63;CL:0000040!6.19e-34!63;CL:0000559!6.19e-34!63;CL:0002009!1.06e-32!65;CL:0000763!1.18e-22!112;CL:0000049!1.18e-22!112;CL:0002031!7.58e-20!124;CL:0000738!3.84e-18!140;CL:0002087!6.37e-18!119;CL:0002032!1.99e-15!165;CL:0000837!1.99e-15!165;CL:0000037!1.72e-14!172;CL:0000566!1.72e-14!172;CL:0000988!2.80e-13!182;CL:0000219!1.22e-08!390;CL:0000134!6.48e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.77e-55!42;CL:0000860!3.84e-51!45;CL:0000839!5.41e-35!70;CL:0000557!2.09e-34!71;CL:0000766!3.05e-34!76;CL:0002194!6.19e-34!63;CL:0000576!6.19e-34!63;CL:0000040!6.19e-34!63;CL:0000559!6.19e-34!63;CL:0002009!1.06e-32!65;CL:0000763!1.18e-22!112;CL:0000049!1.18e-22!112;CL:0002031!7.58e-20!124;CL:0000738!3.84e-18!140;CL:0002087!6.37e-18!119;CL:0002032!1.99e-15!165;CL:0000837!1.99e-15!165;CL:0000037!1.72e-14!172;CL:0000566!1.72e-14!172;CL:0000988!2.80e-13!182;CL:0000219!1.22e-08!390;CL:0000134!6.48e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.82e-71;33!CL:0002057;8.82e-71;33!CL:0000473;3.66e-50;39!CL:0000234;3.66e-50;39!CL:0000576;2.79e-32;48!CL:0000766;7.07e-18;69!CL:0002087;2.27e-12;104!CL:0000763;1.49e-10;100!CL:0000167;3.74e-10;1!CL:0000164;3.74e-10;1!CL:0000502;3.74e-10;1!CL:0000172;3.74e-10;1!CL:0000173;3.74e-10;1!CL:0002553;4.09e-10;1!CL:0000333;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.54e-61,42;CL:0002057,6.54e-61,42;CL:0000473,6.16e-53,48;CL:0000234,6.16e-53,48;CL:0002194,9.16e-42,59;CL:0000576,9.16e-42,59;CL:0000040,9.16e-42,59;CL:0000559,9.16e-42,59;CL:0002009,2.54e-40,61;CL:0000839,4.31e-37,66;CL:0000557,1.67e-36,67;CL:0000766,8.47e-34,72;CL:0002087,1.16e-22,115;CL:0000763,1.24e-21,108;CL:0000049,1.24e-21,108;CL:0002031,1.35e-21,120;CL:0000738,1.07e-18,136;CL:0002032,2.60e-15,161;CL:0000837,2.60e-15,161;CL:0000037,1.53e-14,168;CL:0000988,1.22e-13,177;CL:0000167,3.74e-10,1;CL:0000164,3.74e-10,1;CL:0000502,3.74e-10,1;CL:0000172,3.74e-10,1;CL:0000173,3.74e-10,1;CL:0002351,3.74e-10,1;CL:0002553,4.09e-10,1;CL:0000219,8.43e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-42;42!CL:0002351;3.74e-10;1 | |||
|ontology_enrichment_disease=DOID:169!1.01e-10!6;DOID:171!1.73e-09!10 | |ontology_enrichment_disease=DOID:169!1.01e-10!6;DOID:171!1.73e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:169;2.73e-13;6!DOID:4430;3.74e-10;1!DOID:171;3.55e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.96e-13,6;DOID:4430,3.74e-10,1;DOID:171,3.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!8.78e-30!80;UBERON:0001474!3.11e-27!86;UBERON:0004765!3.51e-22!101;UBERON:0001434!3.51e-22!101;UBERON:0002390!6.76e-22!102;UBERON:0003061!6.76e-22!102;UBERON:0002193!2.46e-19!112;UBERON:0002405!1.18e-18!115;UBERON:0002204!9.10e-11!167;UBERON:0000013!1.65e-07!5;UBERON:0002410!1.65e-07!5;UBERON:0003081!6.84e-07!216;UBERON:0002384!8.68e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.41e-07;5!UBERON:0002410;1.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.90e-32,76;UBERON:0001474,2.30e-29,82;UBERON:0004765,1.62e-26,90;UBERON:0002405,1.42e-25,93;UBERON:0002390,3.96e-24,98;UBERON:0003061,3.96e-24,98;UBERON:0001434,1.37e-23,100;UBERON:0002193,1.24e-21,108;UBERON:0002204,6.09e-13,167;UBERON:0003081,4.24e-10,203;UBERON:0000013,1.50e-07,5;UBERON:0002410,1.50e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,1.23882548358041,1.7261543539329,1.2808035326455,1.41889337933151,5.5159308917859,2.5819387343353,5.41705946377367,0,0.272906150057846,0.224723484445085,3.36692281607993,3.20929027076094,5.11469700639233,0,0,0.426224750532694,1.7412554317715,0.56738522469114,1.86846674698672,2.51248665256743,1.0429658368404,4.12658804939722,2.42159801053347,3.68277635987565,2.84816148696796,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32525365389494,1.40172254815686,0,0.54604819096007,0,0,0.371807292777007,0,0,0,20.8148394554222,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3136921558333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,1.23882548358041,1.7261543539329,1.2808035326455,1.41889337933151,5.5159308917859,2.5819387343353,5.41705946377367,0,0.272906150057846,0.224723484445085,3.36692281607993,3.20929027076094,5.11469700639233,0,0,0.426224750532694,1.7412554317715,0.56738522469114,1.86846674698672,2.51248665256743,1.0429658368404,4.12658804939722,2.42159801053347,3.68277635987565,2.84816148696796,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32525365389494,1.40172254815686,0,0.54604819096007,0,0,0.371807292777007,0,0,0,20.8148394554222,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.3136921558333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:110354471..110354477,- | |short_description=p@chr13:110354471..110354477,- | ||
}} | }} |
Latest revision as of 14:26, 24 July 2015
Short description: | p@chr13:110354471..110354477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110354471..110354477, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.90e-32 | 76 |
bone element | 2.30e-29 | 82 |
skeletal element | 1.62e-26 | 90 |
immune system | 1.42e-25 | 93 |
hematopoietic system | 3.96e-24 | 98 |
blood island | 3.96e-24 | 98 |
skeletal system | 1.37e-23 | 100 |
hemolymphoid system | 1.24e-21 | 108 |
musculoskeletal system | 6.09e-13 | 167 |
lateral plate mesoderm | 4.24e-10 | 203 |
sympathetic nervous system | 1.50e-07 | 5 |
autonomic nervous system | 1.50e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.96e-13 | 6 |
somatostatinoma | 3.74e-10 | 1 |
neuroectodermal tumor | 3.73e-08 | 10 |