FFCP PHASE1:Hg19::chr13:107184398..107184405,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:107184398..107184405,-
|short_description=p@chr13:107184398..107184405,-
|description=CAGE_peak_at_chr13:107184398..107184405,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:107184398..107184405,- | |||
|description=CAGE_peak_at_chr13:107184398..107184405,- | |||
|id=chr13:107184398..107184405,- | |||
|ontology_enrichment_celltype=CL:0000128!7.13e-07!7;CL:0000126!7.13e-07!7;CL:0000127!7.13e-07!7;CL:0002453!7.13e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.09e-16;3!CL:0000540;6.61e-08;6!CL:0000404;6.61e-08;6!CL:0000128;3.39e-07;7!CL:0000126;3.39e-07;7!CL:0000127;3.39e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.46e-16,3;CL:0000540,6.34e-08,6;CL:0000031,6.34e-08,6;CL:0000404,6.34e-08,6;CL:0000128,3.55e-07,7;CL:0000126,3.55e-07,7;CL:0000127,3.55e-07,7;CL:0002453,3.55e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;6.61e-08;6 | |||
|ontology_enrichment_disease=DOID:0050687!3.30e-09!143;DOID:305!1.04e-08!106;DOID:1749!2.21e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.80e-12;14!DOID:3119;1.73e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.79e-12,14;DOID:305,1.65e-10,106;DOID:3119,2.53e-08,14;DOID:0050687,8.37e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.55e-07!173;UBERON:0006601!1.55e-07!173;UBERON:0004121!3.22e-07!169;UBERON:0000344!8.06e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;2.54e-11;4!UBERON:0004785;2.54e-11;4!UBERON:0000974;1.07e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.12e-11,4;UBERON:0004785,5.12e-11,4 | |||
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| ||
|short_description=p@chr13:107184398..107184405,- | |||
}} | }} |
Latest revision as of 14:21, 24 July 2015
Short description: | p@chr13:107184398..107184405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:107184398..107184405, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.46e-16 | 3 |
neuron | 6.34e-08 | 6 |
neuroblast | 6.34e-08 | 6 |
electrically signaling cell | 6.34e-08 | 6 |
oligodendrocyte | 3.55e-07 | 7 |
macroglial cell | 3.55e-07 | 7 |
astrocyte | 3.55e-07 | 7 |
oligodendrocyte precursor cell | 3.55e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.12e-11 | 4 |
respiratory system mucosa | 5.12e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.79e-12 | 14 |
carcinoma | 1.65e-10 | 106 |
gastrointestinal system cancer | 2.53e-08 | 14 |
cell type cancer | 8.37e-08 | 143 |