FFCP PHASE1:Hg19::chr13:102220045..102220071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:102220045..102220071,+ | |||
|coexpression_cluster_id=C698 | |||
|description=CAGE_peak_at_chr13:102220045..102220071,+ | |description=CAGE_peak_at_chr13:102220045..102220071,+ | ||
|id=chr13:102220045..102220071,+ | |id=chr13:102220045..102220071,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.04e-25!75;CL:0000055!3.95e-18!180;CL:0002334!1.62e-13!12;CL:0002620!1.11e-10!23 | |ontology_enrichment_celltype=CL:0000057!5.04e-25!75;CL:0000055!3.95e-18!180;CL:0002334!1.62e-13!12;CL:0002620!1.11e-10!23 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.39e-16;6!CL:0000098;1.39e-16;6!CL:0002167;1.39e-16;6!CL:0002617;1.24e-12;2!CL:0002334;6.22e-12;12!CL:0000136;3.38e-11;13!CL:0002615;7.61e-09;3!CL:0002579;1.04e-08;3!CL:0000135;1.74e-08;3!CL:0002580;1.74e-08;3!CL:0000515;1.74e-08;3!CL:0000388;1.74e-08;3!CL:0002581;1.85e-07;1!CL:0002616;1.85e-07;1!CL:0000222;5.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.32e-16,6;CL:0000098,1.32e-16,6;CL:0002167,1.32e-16,6;CL:0002617,1.36e-12,2;CL:0002334,5.37e-12,12;CL:0000057,8.61e-12,76;CL:0000136,1.14e-09,15;CL:0002579,6.40e-09,3;CL:0002615,6.92e-09,3;CL:0002580,2.19e-08,3;CL:0000135,2.36e-08,3;CL:0000388,2.36e-08,3;CL:0002581,1.86e-07,1;CL:0002616,1.98e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.60e-07;1!UBERON:0003852;5.60e-07;1 | |||
|ontology_enrichment_disease=DOID:17!3.20e-08!5;DOID:450!3.20e-08!5;DOID:66!3.20e-08!5;DOID:423!3.20e-08!5;DOID:0080000!3.20e-08!5;DOID:11722!3.20e-08!5 | |ontology_enrichment_disease=DOID:17!3.20e-08!5;DOID:450!3.20e-08!5;DOID:66!3.20e-08!5;DOID:423!3.20e-08!5;DOID:0080000!3.20e-08!5;DOID:11722!3.20e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:3369;2.16e-07;1!DOID:2513;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.23e-07,1;DOID:2513,6.88e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.16e-09!6;UBERON:0002358!1.16e-09!6;UBERON:0003684!1.16e-09!6;UBERON:0001178!1.16e-09!6;UBERON:0003102!8.77e-09!95;UBERON:0004457!1.51e-07!12;UBERON:0000042!1.51e-07!12;UBERON:0002199!1.68e-07!45;UBERON:0002416!1.68e-07!45;UBERON:0002097!3.43e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.09e-16;9!UBERON:0000042;5.09e-16;9!UBERON:0003688;7.25e-16;6!UBERON:0002358;7.25e-16;6!UBERON:0003684;7.25e-16;6!UBERON:0001178;7.25e-16;6!UBERON:0005406;3.08e-13;2!UBERON:0000310;2.32e-09;10!UBERON:0001443;1.61e-08;11!UBERON:0007846;1.74e-08;3!UBERON:0000043;1.74e-08;3!UBERON:0007845;1.74e-08;3!UBERON:0005705;5.60e-07;1!UBERON:0008193;5.60e-07;1!UBERON:0010912;5.60e-07;1!UBERON:0002514;5.60e-07;1!UBERON:0003457;5.60e-07;1!UBERON:0008907;5.60e-07;1!UBERON:0008001;5.60e-07;1!UBERON:0007213;5.60e-07;1!UBERON:0009891;5.60e-07;1!UBERON:0007914;5.60e-07;1!UBERON:0007375;5.60e-07;1!UBERON:0003323;5.60e-07;1!UBERON:0010258;5.60e-07;1!UBERON:0005253;5.60e-07;1!UBERON:0007842;5.60e-07;1!UBERON:0002397;5.60e-07;1!UBERON:0003113;5.60e-07;1!UBERON:0003277;5.60e-07;1!UBERON:0001709;5.60e-07;1!UBERON:0002244;5.60e-07;1!UBERON:0005620;5.60e-07;1!UBERON:0010364;5.60e-07;1!UBERON:0004288;5.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.09e-16,6;UBERON:0002358,4.09e-16,6;UBERON:0003684,4.09e-16,6;UBERON:0001178,4.09e-16,6;UBERON:0005406,3.28e-13,2;UBERON:0004457,3.36e-12,12;UBERON:0000042,3.36e-12,12;UBERON:0000310,2.74e-09,10;UBERON:0001443,1.88e-08,11;UBERON:0007846,2.36e-08,3;UBERON:0000043,2.36e-08,3;UBERON:0007845,2.36e-08,3 | |||
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|phase1_expression=1.2717486548939,2.35510576280081,0.563817616383885,6.00439790118782,1.34088328328186,4.36169262050184,0,0,0,0,0,0,0,0.247532705920093,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.379891534993739,0.132409180813219,1.72101972449288,0.709336764396714,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.61417158655884,0.413303124703062,0,1.7308685049499,0,0,0.168336113954066,0.125118519871964,0,0,1.22595118319608,1.05166641234618,0,0.717558542755448,0.85422955527427,0.847727604638247,1.50045548042201,0.824420233907511,0.257640540045629,1.11670113798954,0.168776332241266,0.876933046450788,0.252433774244115,0.0920498986422993,0.80823028409406,1.42003837006646,0.503760491138201,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,1.15825045334063,1.64381058040307,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,4.99130067673937,5.53129865271201,3.78485796081443,7.1456263145555,0.601892199455438,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,1.40330047216537,0.256278298511402,2.55853624533352,1.93024705372329,4.45254199334973,0.154209693802656,0.355123450626254,0,0.519254429183621,0.348631135379878,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,2.51849877464512,0,0,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,1.12990370390266,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,0,0.457680136793847,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0.680117776536817,0,0,0.71635536432595,0.926404341482917,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0,1.2679671827502,0.509781344063451,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,1.11598505450025,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0.476128862927481,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr13:102220045..102220071,+ | |short_description=p@chr13:102220045..102220071,+ | ||
}} | }} |
Latest revision as of 14:15, 24 July 2015
Short description: | p@chr13:102220045..102220071, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:102220045..102220071, + |
Coexpression cluster: | C698_Smooth_Adipocyte_Fibroblast_Preadipocyte_Olfactory_Ewing_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.32e-16 | 6 |
sensory epithelial cell | 1.32e-16 | 6 |
olfactory epithelial cell | 1.32e-16 | 6 |
adipocyte of breast | 1.36e-12 | 2 |
preadipocyte | 5.37e-12 | 12 |
fibroblast | 8.61e-12 | 76 |
fat cell | 1.14e-09 | 15 |
omentum preadipocyte | 6.40e-09 | 3 |
adipocyte of omentum tissue | 6.92e-09 | 3 |
preadipocyte of the breast | 2.19e-08 | 3 |
fibrocyte | 2.36e-08 | 3 |
tendon cell | 2.36e-08 | 3 |
perirenal preadipocyte | 1.86e-07 | 1 |
perirenal adipocyte cell | 1.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.09e-16 | 6 |
peritoneum | 4.09e-16 | 6 |
abdominal cavity | 4.09e-16 | 6 |
visceral peritoneum | 4.09e-16 | 6 |
perirenal fat | 3.28e-13 | 2 |
cavity lining | 3.36e-12 | 12 |
serous membrane | 3.36e-12 | 12 |
breast | 2.74e-09 | 10 |
chest | 1.88e-08 | 11 |
dense regular connective tissue | 2.36e-08 | 3 |
tendon | 2.36e-08 | 3 |
regular connective tissue | 2.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.23e-07 | 1 |
basal cell carcinoma | 6.88e-07 | 1 |