FFCP PHASE1:Hg19::chr12:92860585..92860604,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:92860585..92860604,+
|short_description=p1@uc001tcg.1
|description=CAGE_peak_1_at_uc001tcg.1_5end
|association_with_transcript=130bp_to_uc001tcg.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_uc001tcg.1_5end | |||
|cluster_id=chr12:92860585..92860604,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_uc001tcg.1_5end | |||
|id=chr12:92860585..92860604,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.12e-28!24;CL:0000826!4.12e-28!24;CL:0000236!5.50e-21!14;CL:0002087!2.05e-14!119;CL:0000542!1.56e-13!53;CL:0000051!1.56e-13!53;CL:0000738!5.91e-13!140;CL:0000838!1.24e-12!52;CL:0002031!7.39e-11!124;CL:0000037!1.90e-08!172;CL:0000566!1.90e-08!172;CL:0000988!2.94e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.15e-48;24!CL:0000236;1.58e-31;13!CL:0000542;7.90e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.83e-49,24;CL:0000826,8.83e-49,24;CL:0000236,6.76e-34,14;CL:0000542,8.81e-21,53;CL:0000051,8.81e-21,53;CL:0000838,3.49e-19,52;CL:0002087,1.62e-13,115;CL:0000738,3.42e-11,136;CL:0002031,1.11e-09,120;CL:0000037,1.22e-07,168;CL:0000988,6.82e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.90e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-37!115;UBERON:0001049!5.08e-13!57;UBERON:0005068!5.08e-13!57;UBERON:0006241!5.08e-13!57;UBERON:0007135!5.08e-13!57;UBERON:0000178!1.69e-12!15;UBERON:0000179!1.69e-12!15;UBERON:0000463!1.69e-12!15;UBERON:0002616!2.99e-11!59;UBERON:0001017!3.61e-11!82;UBERON:0005743!6.15e-11!86;UBERON:0002780!3.63e-10!41;UBERON:0001890!3.63e-10!41;UBERON:0006240!3.63e-10!41;UBERON:0003080!8.80e-10!42;UBERON:0000955!9.18e-10!69;UBERON:0006238!9.18e-10!69;UBERON:0001893!1.35e-09!34;UBERON:0002791!4.62e-09!33;UBERON:0000073!5.68e-09!94;UBERON:0001016!5.68e-09!94;UBERON:0002020!7.87e-09!34;UBERON:0003528!7.87e-09!34;UBERON:0003075!3.23e-08!86;UBERON:0007284!3.23e-08!86;UBERON:0001869!3.73e-08!32;UBERON:0002619!4.66e-08!22;UBERON:0002390!5.07e-08!102;UBERON:0003061!5.07e-08!102;UBERON:0002193!8.32e-08!112;UBERON:0001950!1.12e-07!20;UBERON:0002346!1.79e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-20;15!UBERON:0000179;3.36e-20;15!UBERON:0000463;3.36e-20;15!UBERON:0002390;1.15e-14;32!UBERON:0002193;3.81e-10;42!UBERON:0002106;5.68e-09;3!UBERON:0004177;7.61e-09;5!UBERON:0005057;7.61e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.02e-20,15;UBERON:0000179,4.02e-20,15;UBERON:0000463,4.02e-20,15;UBERON:0007023,2.88e-19,114;UBERON:0002106,7.66e-09,3;UBERON:0004854,7.66e-09,3;UBERON:0009034,7.66e-09,3;UBERON:0002095,7.66e-09,3;UBERON:0004782,7.66e-09,3;UBERON:0003281,7.66e-09,3;UBERON:0009664,7.66e-09,3;UBERON:0002296,7.66e-09,3;UBERON:0005602,7.66e-09,3;UBERON:0001179,7.66e-09,3;UBERON:0006293,7.66e-09,3;UBERON:0002193,4.89e-07,108 | |||
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| ||
|short_description=p1@uc001tcg.1 | |||
}} | }} |
Latest revision as of 13:35, 24 July 2015
Short description: | p1@uc001tcg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001tcg.1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 130bp_to_uc001tcg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.83e-49 | 24 |
pro-B cell | 8.83e-49 | 24 |
B cell | 6.76e-34 | 14 |
lymphocyte | 8.81e-21 | 53 |
common lymphoid progenitor | 8.81e-21 | 53 |
lymphoid lineage restricted progenitor cell | 3.49e-19 | 52 |
nongranular leukocyte | 1.62e-13 | 115 |
leukocyte | 3.42e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 1.11e-09 | 120 |
hematopoietic stem cell | 1.22e-07 | 168 |
hematopoietic cell | 6.82e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.02e-20 | 15 |
haemolymphatic fluid | 4.02e-20 | 15 |
organism substance | 4.02e-20 | 15 |
adult organism | 2.88e-19 | 114 |
spleen | 7.66e-09 | 3 |
gastrointestinal system mesentery | 7.66e-09 | 3 |
stomach region | 7.66e-09 | 3 |
mesentery | 7.66e-09 | 3 |
gastrointestinal system serosa | 7.66e-09 | 3 |
mesentery of stomach | 7.66e-09 | 3 |
gut mesentery | 7.66e-09 | 3 |
dorsal mesentery | 7.66e-09 | 3 |
dorsal mesogastrium | 7.66e-09 | 3 |
peritoneal cavity | 7.66e-09 | 3 |
spleen primordium | 7.66e-09 | 3 |
hemolymphoid system | 4.89e-07 | 108 |