FFCP PHASE1:Hg19::chr12:92860457..92860483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001tcg.1_5end | |association_with_transcript=2bp_to_uc001tcg.1_5end | ||
|cluster_id=chr12:92860457..92860483,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_uc001tcg.1_5end | |description=CAGE_peak_2_at_uc001tcg.1_5end | ||
|id=chr12:92860457..92860483,+ | |id=chr12:92860457..92860483,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.04e-30!24;CL:0000826!3.04e-30!24;CL:0000236!3.50e-22!14;CL:0000542!9.31e-12!53;CL:0000051!9.31e-12!53;CL:0000838!7.59e-11!52;CL:0000188!2.84e-09!9;CL:0002087!2.26e-07!119;CL:0002031!4.13e-07!124;CL:0000738!7.07e-07!140 | |ontology_enrichment_celltype=CL:0000945!3.04e-30!24;CL:0000826!3.04e-30!24;CL:0000236!3.50e-22!14;CL:0000542!9.31e-12!53;CL:0000051!9.31e-12!53;CL:0000838!7.59e-11!52;CL:0000188!2.84e-09!9;CL:0002087!2.26e-07!119;CL:0002031!4.13e-07!124;CL:0000738!7.07e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.82e-55;24!CL:0000236;6.46e-36;13!CL:0000542;8.22e-17;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.29e-55,24;CL:0000826,1.29e-55,24;CL:0000236,3.18e-39,14;CL:0000542,3.64e-25,53;CL:0000051,3.64e-25,53;CL:0000838,5.46e-23,52;CL:0002087,5.54e-11,115;CL:0000738,1.72e-09,136;CL:0002031,3.58e-09,120;CL:0000785,1.60e-08,2;CL:0000955,1.60e-08,2;CL:0000818,1.60e-08,2;CL:0000954,1.60e-08,2;CL:0000816,1.60e-08,2;CL:0000988,7.98e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;8.22e-17;53!UBERON:0004872;1.03e-08;7!CL:0000954;2.16e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.12e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.32e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-23!115;UBERON:0001049!1.82e-11!57;UBERON:0005068!1.82e-11!57;UBERON:0006241!1.82e-11!57;UBERON:0007135!1.82e-11!57;UBERON:0001017!4.25e-09!82;UBERON:0001893!7.80e-09!34;UBERON:0002616!8.97e-09!59;UBERON:0005743!2.67e-08!86;UBERON:0002791!3.00e-08!33;UBERON:0002020!4.30e-08!34;UBERON:0003528!4.30e-08!34;UBERON:0001869!1.60e-07!32;UBERON:0002780!2.18e-07!41;UBERON:0001890!2.18e-07!41;UBERON:0006240!2.18e-07!41;UBERON:0003080!4.18e-07!42;UBERON:0002619!4.27e-07!22;UBERON:0000073!8.82e-07!94;UBERON:0001016!8.82e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.48e-12;3!UBERON:0000178;2.80e-08;15!UBERON:0000179;2.80e-08;15!UBERON:0000463;2.80e-08;15!UBERON:0002390;1.77e-07;32!UBERON:0004177;3.00e-07;5!UBERON:0005057;3.00e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.08e-11,3;UBERON:0004854,1.08e-11,3;UBERON:0009034,1.08e-11,3;UBERON:0002095,1.08e-11,3;UBERON:0004782,1.08e-11,3;UBERON:0003281,1.08e-11,3;UBERON:0009664,1.08e-11,3;UBERON:0002296,1.08e-11,3;UBERON:0005602,1.08e-11,3;UBERON:0001179,1.08e-11,3;UBERON:0006293,1.08e-11,3;UBERON:0000178,3.56e-08,15;UBERON:0000179,3.56e-08,15;UBERON:0000463,3.56e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04328477936478,3.9408282935974,4.95877922276179,0,0,0.154816123316076,0,0,0,4.33816323249689,7.39280008934592,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,31.6793240030381,31.6760394532036,34.6908609006786,22.6167017960249,31.230886988809,25.8638597979517,31.0691090208885,21.9432363543134,6.83055562931338,0.587237189370939,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.953962497221368,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,4.44685304143761,0.308097234229289,0.614014698904518,1.51620229732984,0.107420244868274,0.145016693914229,0.340906509664404,11.8412607410161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,3.33524485640905,3.29089818468955,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,18.5803175125719,0.721346064882224,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,3.03912307084262,0,0,0.861593638227486,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,1.99042667876204,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,3.64909578431332,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.321506296930038,0.412618309791701,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79339561045614,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.9846640872478,0.592834895693833,1.46151118057075,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,1.76450187355203,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,1.64092442705466,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,1.95897778844825,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,3.47716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.981542335574726,2.67341760294377,0,0,3.66537280121429,1.28915775947154,2.29864658627337,0,0,0,0,0,0.430018749454354,0,0,1.74540276136151,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,2.85677317756488,0.452122368852043,0.248298857183432,0,0.190941474834495,0,0.870866991587845,2.39563310759697,2.82878622661268,0.430333232356058,0.332660356546013,0,0,0,0,0,0,0,0,2.01273793591026,8.65534929218729 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04328477936478,3.9408282935974,4.95877922276179,0,0,0.154816123316076,0,0,0,4.33816323249689,7.39280008934592,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,31.6793240030381,31.6760394532036,34.6908609006786,22.6167017960249,31.230886988809,25.8638597979517,31.0691090208885,21.9432363543134,6.83055562931338,0.587237189370939,2.6759125968766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.953962497221368,0,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,4.44685304143761,0.308097234229289,0.614014698904518,1.51620229732984,0.107420244868274,0.145016693914229,0.340906509664404,11.8412607410161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,3.33524485640905,3.29089818468955,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,18.5803175125719,0.721346064882224,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,3.03912307084262,0,0,0.861593638227486,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,1.99042667876204,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,3.64909578431332,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.544813624446302,0.321506296930038,0.412618309791701,0.415440338029185,0.2249738915515,0,0.0607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79339561045614,0,0,0.320362237703084,0.157204305099666,0.414239055347196,1.9846640872478,0.592834895693833,1.46151118057075,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0.554645257684261,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,1.76450187355203,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,1.64092442705466,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,1.95897778844825,0.171488009437418,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,3.47716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,4.6392577253528,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.981542335574726,2.67341760294377,0,0,3.66537280121429,1.28915775947154,2.29864658627337,0,0,0,0,0,0.430018749454354,0,0,1.74540276136151,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,2.85677317756488,0.452122368852043,0.248298857183432,0,0.190941474834495,0,0.870866991587845,2.39563310759697,2.82878622661268,0.430333232356058,0.332660356546013,0,0,0,0,0,0,0,0,2.01273793591026,8.65534929218729 | ||
|short_description=p2@uc001tcg.1 | |short_description=p2@uc001tcg.1 | ||
}} | }} |
Latest revision as of 13:35, 24 July 2015
Short description: | p2@uc001tcg.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001tcg.1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 2bp_to_uc001tcg.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.29e-55 | 24 |
pro-B cell | 1.29e-55 | 24 |
B cell | 3.18e-39 | 14 |
lymphocyte | 3.64e-25 | 53 |
common lymphoid progenitor | 3.64e-25 | 53 |
lymphoid lineage restricted progenitor cell | 5.46e-23 | 52 |
nongranular leukocyte | 5.54e-11 | 115 |
leukocyte | 1.72e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 3.58e-09 | 120 |
mature B cell | 1.60e-08 | 2 |
pre-B-II cell | 1.60e-08 | 2 |
transitional stage B cell | 1.60e-08 | 2 |
small pre-B-II cell | 1.60e-08 | 2 |
immature B cell | 1.60e-08 | 2 |
hematopoietic cell | 7.98e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.08e-11 | 3 |
gastrointestinal system mesentery | 1.08e-11 | 3 |
stomach region | 1.08e-11 | 3 |
mesentery | 1.08e-11 | 3 |
gastrointestinal system serosa | 1.08e-11 | 3 |
mesentery of stomach | 1.08e-11 | 3 |
gut mesentery | 1.08e-11 | 3 |
dorsal mesentery | 1.08e-11 | 3 |
dorsal mesogastrium | 1.08e-11 | 3 |
peritoneal cavity | 1.08e-11 | 3 |
spleen primordium | 1.08e-11 | 3 |
blood | 3.56e-08 | 15 |
haemolymphatic fluid | 3.56e-08 | 15 |
organism substance | 3.56e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.32e-09 | 10 |