FFCP PHASE1:Hg19::chr12:9229977..9230013,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9229977..9230013,- | |||
|coexpression_cluster_id=C1182 | |coexpression_cluster_id=C1182 | ||
|description=CAGE_peak_at_chr12:9229977..9230013,- | |description=CAGE_peak_at_chr12:9229977..9230013,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;6.60e-15;3!CL:0000182;1.05e-13;12!CL:0000235;1.86e-07;6!CL:0000840;2.71e-07;5 | |ontology_enrichment_celltype_v019=CL:0002567;6.60e-15;3!CL:0000182;1.05e-13;12!CL:0000235;1.86e-07;6!CL:0000840;2.71e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.27e-15,3;CL:0000182,1.01e-13,12;CL:0000235,1.82e-07,6;CL:0000840,2.32e-07,5;CL:0001029,2.32e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.06e-11;31!UBERON:0004161;9.67e-11;11!UBERON:0007297;2.48e-10;2!UBERON:0001041;4.83e-09;30!UBERON:0009497;4.86e-09;13 | |ontology_enrichment_development_v019=UBERON:0003104;8.06e-11;31!UBERON:0004161;9.67e-11;11!UBERON:0007297;2.48e-10;2!UBERON:0001041;4.83e-09;30!UBERON:0009497;4.86e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.07e-46!115;UBERON:0000062!2.05e-12!511;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0000467!7.18e-08!625;UBERON:0000480!8.44e-08!626;UBERON:0000468!5.69e-07!659;UBERON:0002616!7.01e-07!59;UBERON:0004921!9.06e-07!129;UBERON:0004185!9.06e-07!129;UBERON:0001017!9.30e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!2.07e-46!115;UBERON:0000062!2.05e-12!511;UBERON:0001049!3.38e-08!57;UBERON:0005068!3.38e-08!57;UBERON:0006241!3.38e-08!57;UBERON:0007135!3.38e-08!57;UBERON:0000467!7.18e-08!625;UBERON:0000480!8.44e-08!626;UBERON:0000468!5.69e-07!659;UBERON:0002616!7.01e-07!59;UBERON:0004921!9.06e-07!129;UBERON:0004185!9.06e-07!129;UBERON:0001017!9.30e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.39e-15;19!UBERON:0006925;6.39e-15;19!UBERON:0002423;5.05e-11;25!UBERON:0005090;8.78e-10;2!UBERON:0001630;8.78e-10;2!UBERON:0002365;2.38e-08;31!UBERON:0002330;2.38e-08;31!UBERON:0004151;2.02e-07;3!UBERON:0002368;2.20e-07;33!UBERON:0006947;3.71e-07;3!UBERON:0004054;3.71e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002107;6.39e-15;19!UBERON:0006925;6.39e-15;19!UBERON:0002423;5.05e-11;25!UBERON:0005090;8.78e-10;2!UBERON:0001630;8.78e-10;2!UBERON:0002365;2.38e-08;31!UBERON:0002330;2.38e-08;31!UBERON:0004151;2.02e-07;3!UBERON:0002368;2.20e-07;33!UBERON:0006947;3.71e-07;3!UBERON:0004054;3.71e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.40e-15,19;UBERON:0006925,6.40e-15,19;UBERON:0008836,6.40e-15,19;UBERON:0008835,1.05e-12,22;UBERON:0003894,1.05e-12,22;UBERON:0009854,4.28e-12,23;UBERON:0007499,5.06e-11,25;UBERON:0009497,5.06e-11,25;UBERON:0000015,5.06e-11,25;UBERON:0002423,5.06e-11,25;UBERON:0006235,5.06e-11,25;UBERON:0004161,5.06e-11,25;UBERON:0009856,1.51e-10,26;UBERON:0007023,3.80e-10,114;UBERON:0005090,7.01e-10,2;UBERON:0001630,7.01e-10,2;UBERON:0002365,1.23e-08,31;UBERON:0002330,1.23e-08,31;UBERON:0002368,1.67e-07,35;UBERON:0004151,2.02e-07,3;UBERON:0005177,3.09e-07,101;UBERON:0006947,3.23e-07,3;UBERON:0004054,3.23e-07,3;UBERON:0005256,3.82e-07,122;UBERON:0005172,6.12e-07,54;UBERON:0005173,6.12e-07,54 | |||
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|short_description=p@chr12:9229977..9230013,- | |short_description=p@chr12:9229977..9230013,- | ||
}} | }} |
Latest revision as of 13:31, 24 July 2015
Short description: | p@chr12:9229977..9230013, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9229977..9230013, - |
Coexpression cluster: | C1182_Hepatocyte_lung_liver_Monocytederived_hepatocellular_heart_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.27e-15 | 3 |
hepatocyte | 1.01e-13 | 12 |
macrophage | 1.82e-07 | 6 |
immature conventional dendritic cell | 2.32e-07 | 5 |
common dendritic progenitor | 2.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 6.40e-15 | 19 |
digestive gland | 6.40e-15 | 19 |
liver bud | 6.40e-15 | 19 |
hepatic diverticulum | 1.05e-12 | 22 |
liver primordium | 1.05e-12 | 22 |
digestive tract diverticulum | 4.28e-12 | 23 |
epithelial sac | 5.06e-11 | 25 |
epithelium of foregut-midgut junction | 5.06e-11 | 25 |
anatomical boundary | 5.06e-11 | 25 |
hepatobiliary system | 5.06e-11 | 25 |
foregut-midgut junction | 5.06e-11 | 25 |
septum transversum | 5.06e-11 | 25 |
sac | 1.51e-10 | 26 |
adult organism | 3.80e-10 | 114 |
muscle structure | 7.01e-10 | 2 |
muscle organ | 7.01e-10 | 2 |
exocrine gland | 1.23e-08 | 31 |
exocrine system | 1.23e-08 | 31 |
endocrine gland | 1.67e-07 | 35 |
cardiac chamber | 2.02e-07 | 3 |
trunk region element | 3.09e-07 | 101 |
male genital duct | 3.23e-07 | 3 |
internal male genitalia | 3.23e-07 | 3 |
trunk mesenchyme | 3.82e-07 | 122 |
abdomen element | 6.12e-07 | 54 |
abdominal segment element | 6.12e-07 | 54 |