FFCP PHASE1:Hg19::chr12:91539918..91539946,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:91539918..91539946,- | |||
|coexpression_cluster_id=C540 | |||
|description=CAGE_peak_at_chr12:91539918..91539946,- | |||
|id=chr12:91539918..91539946,- | |||
|ontology_enrichment_celltype=CL:0000057!4.00e-11!75;CL:0000055!2.90e-09!180;CL:0000153!2.49e-07!9;CL:0000447!2.49e-07!9;CL:0000499!4.59e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.37e-13;9!CL:0000447;1.37e-13;9!CL:0000138;1.27e-10;6!CL:0000135;2.22e-09;3!CL:0000388;2.22e-09;3!CL:0000327;1.12e-07;15!CL:0000499;1.28e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.42e-13,9;CL:0000447,1.42e-13,9;CL:0000058,1.44e-10,6;CL:0000138,1.44e-10,6;CL:0000135,2.24e-09,3;CL:0000388,2.24e-09,3;CL:0000136,7.47e-08,15;CL:0000327,1.14e-07,15;CL:0000499,1.31e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.35e-10;4!UBERON:0007284;1.35e-10;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.80e-10!27;UBERON:0000948!1.75e-09!24;UBERON:0005498!1.75e-09!24;UBERON:0004140!1.75e-09!24;UBERON:0009881!1.75e-09!24;UBERON:0004141!1.75e-09!24;UBERON:0003084!1.75e-09!24;UBERON:0007005!1.75e-09!24;UBERON:0004139!1.75e-09!24;UBERON:0004291!1.75e-09!24;UBERON:0003102!4.50e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-11;25!UBERON:0007846;2.22e-09;3!UBERON:0000043;2.22e-09;3!UBERON:0007845;2.22e-09;3!UBERON:0000948;3.29e-09;22!UBERON:0006947;2.01e-08;3!UBERON:0004054;2.01e-08;3!UBERON:0003978;4.20e-08;3!UBERON:0000946;4.20e-08;3!UBERON:0004151;5.44e-08;3!UBERON:0004457;2.30e-07;9!UBERON:0000042;2.30e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.12e-10,27;UBERON:0007846,2.24e-09,3;UBERON:0000043,2.24e-09,3;UBERON:0007845,2.24e-09,3;UBERON:0006947,1.14e-08,3;UBERON:0004054,1.14e-08,3;UBERON:0000948,3.32e-08,24;UBERON:0005498,3.32e-08,24;UBERON:0004140,3.32e-08,24;UBERON:0009881,3.32e-08,24;UBERON:0004141,3.32e-08,24;UBERON:0003084,3.32e-08,24;UBERON:0007005,3.32e-08,24;UBERON:0004139,3.32e-08,24;UBERON:0004291,3.32e-08,24;UBERON:0003978,4.91e-08,3;UBERON:0009751,4.91e-08,3;UBERON:0000946,4.91e-08,3;UBERON:0002523,4.91e-08,3;UBERON:0005983,4.91e-08,3;UBERON:0002165,4.91e-08,3;UBERON:0002062,4.91e-08,3;UBERON:0007280,4.91e-08,3;UBERON:0004151,6.58e-08,3 | |||
|phase1_expression=2.90685406832891,1.92690471501885,0.422863212287913,8.00586386825043,3.5756887554183,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0,2.1686349143074,3.00802746381534,7.67686550492366,1.5905718941022,1.45990461090791,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.12663051166458,0,2.0078563452417,0,0.560677600142307,0,0,0.311211035399766,0.67355336034844,1.30769522490767,0.908144565869588,2.88087962239999,0,0,0,0.747243402759005,0.117434498643765,0,0,0.204154171254893,0,0.206651562351531,3.56400857184616,2.22540236350701,0,0,0,0.125118519871964,0.554128230968366,1.31693286264251,0.919463387397059,0.751190294532984,0.907457465280168,0.179389635688862,0.640672166455702,0.847727604638247,0.600182192168805,0.824420233907511,0,0.37223371266318,0,0.194874010322397,1.51460264546469,1.65689817556139,1.61646056818812,1.77504796258307,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,2.88751792667834,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,1.77236972004421,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,1.14382394926518,0.542621605391443,0,0,0.710783897485092,0,0,0,0,0,0,0,0,1.14861935834114,0,4.1986578933598,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,1.24053903909388,0.920771839728375,0.561320188866147,0.512556597022804,1.53512174720011,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.464841513839837,0,0,0,0.68888668898764,0.910455840033585,0.786746489756545,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0,0,0,0,0,0,0,1.88887408098384,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.571890581771475,0,1.28381696410176,0.318203247925937,0,1.43897966066652,0.54907405947211,0.589062011728432,0,1.58510321173008,0.421258456238981,0.48763373908959,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0,3.58882980006029,8.89096210991735,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.47748896947538,0.593929361665277,0,0,0,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0.933118762985422,0,0,0,1.87422470710174,0,3.33410970433911,1.93866549219044,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,1.07730361905316,0,0,0,0,0.957003479195758,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,4.81546588379273,0,0,0,0,1.97292201424695,2.41981432097328,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,5.76598005198699,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,1.3749625440701,1.43574604915363,0,1.71690419254628,1.11585728720936,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,1.42939065274673,3.31045985182716,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,1.06787412567695,0.471612915298998,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,0.757612021100357,2.0125432140206,3.55924488638614,0,0.907385542579434,0.932623203496683,1.33069634990671,0,0,0,0,0.265841714557995,0,0.300515217994437,0.380805212168795,0.406870733204662,0.909243296012797,0.214821114084977,0.464033759878494,0.398095888698616,0,2.40376993627955,3.36749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0.247871528518004,0,0.636008701306837,0,0,4.93746321166957,2.4499638188256,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,5.95453414067153,0.175871244359621,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,3.65263488203798,0,0,0.214429632529969,0,0,0.173858272302579,6.41369091784202,0.414432328326074,0.17071847709395,0.691259661814092,0.430227358820278,0,0,2.54032230114557,0,0,0,0,0,0,0,0.513314034281235,2.3196288626764,0.971421986118279,0,0,0.475680363110274,0,0,0,0.308696632431779,0.655678681511872,0,1.9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| |||
|short_description=p@chr12:91539918..91539946,- | |||
}} |
Latest revision as of 13:28, 24 July 2015
Short description: | p@chr12:91539918..91539946, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91539918..91539946, - |
Coexpression cluster: | C540_tenocyte_Chondrocyte_Adipocyte_normal_Synoviocyte_Fibroblast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.42e-13 | 9 |
carbohydrate secreting cell | 1.42e-13 | 9 |
chondroblast | 1.44e-10 | 6 |
chondrocyte | 1.44e-10 | 6 |
fibrocyte | 2.24e-09 | 3 |
tendon cell | 2.24e-09 | 3 |
fat cell | 7.47e-08 | 15 |
extracellular matrix secreting cell | 1.14e-07 | 15 |
stromal cell | 1.31e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 3.12e-10 | 27 |
dense regular connective tissue | 2.24e-09 | 3 |
tendon | 2.24e-09 | 3 |
regular connective tissue | 2.24e-09 | 3 |
male genital duct | 1.14e-08 | 3 |
internal male genitalia | 1.14e-08 | 3 |
heart | 3.32e-08 | 24 |
primitive heart tube | 3.32e-08 | 24 |
primary heart field | 3.32e-08 | 24 |
anterior lateral plate mesoderm | 3.32e-08 | 24 |
heart tube | 3.32e-08 | 24 |
heart primordium | 3.32e-08 | 24 |
cardiac mesoderm | 3.32e-08 | 24 |
cardiogenic plate | 3.32e-08 | 24 |
heart rudiment | 3.32e-08 | 24 |
valve | 4.91e-08 | 3 |
cardiac mesenchyme | 4.91e-08 | 3 |
cardial valve | 4.91e-08 | 3 |
tunica intima | 4.91e-08 | 3 |
heart layer | 4.91e-08 | 3 |
endocardium | 4.91e-08 | 3 |
endocardial cushion | 4.91e-08 | 3 |
presumptive endocardium | 4.91e-08 | 3 |
cardiac chamber | 6.58e-08 | 3 |