FFCP PHASE1:Hg19::chr12:91435143..91435151,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:91435143..91435151,- | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr12:91435143..91435151,- | |||
|id=chr12:91435143..91435151,- | |||
|ontology_enrichment_celltype=CL:0002253!1.72e-10!2;CL:0000214!1.82e-07!3;CL:0002178!2.63e-07!3;CL:0002150!3.35e-07!3;CL:0000861!3.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.27e-34;3!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.27e-34,3;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!2.34e-12!14;DOID:3095!4.78e-08!22;DOID:2994!4.78e-08!22;DOID:0050687!1.34e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001301!3.25e-19!1;UBERON:0000945!4.62e-10!8;UBERON:0010039!4.62e-10!8;UBERON:0003135!1.62e-07!11;UBERON:0006915!1.82e-07!3;UBERON:0002018!1.82e-07!3;UBERON:0002217!1.82e-07!3;UBERON:0007616!1.82e-07!3;UBERON:0006947!2.79e-07!3;UBERON:0004054!2.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;4.27e-34;3!UBERON:0007616;4.27e-34;3!UBERON:0002217;4.27e-34;3!UBERON:0002018;4.27e-34;3!UBERON:0000945;5.15e-21;5!UBERON:0010039;5.15e-21;5!UBERON:0004905;9.39e-14;8!UBERON:0000982;9.39e-14;8!UBERON:0004770;9.39e-14;8!UBERON:0004457;2.19e-12;9!UBERON:0000042;2.19e-12;9!UBERON:0000486;1.22e-09;12!UBERON:0001041;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.27e-34,3;UBERON:0007616,4.27e-34,3;UBERON:0002217,4.27e-34,3;UBERON:0002018,4.27e-34,3;UBERON:0004905,9.39e-14,8;UBERON:0000982,9.39e-14,8;UBERON:0004770,9.39e-14,8;UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0004457,1.22e-09,12;UBERON:0000042,1.22e-09,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,5.95590300062761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,97.0295107488085,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:91435143..91435151,- | |||
}} |
Latest revision as of 13:27, 24 July 2015
Short description: | p@chr12:91435143..91435151, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:91435143..91435151, - |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.27e-34 | 3 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.27e-34 | 3 |
layer of synovial tissue | 4.27e-34 | 3 |
synovial joint | 4.27e-34 | 3 |
synovial membrane of synovial joint | 4.27e-34 | 3 |
articulation | 9.39e-14 | 8 |
skeletal joint | 9.39e-14 | 8 |
articular system | 9.39e-14 | 8 |
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
cavity lining | 1.22e-09 | 12 |
serous membrane | 1.22e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.00e-08 | 14 |