FFCP PHASE1:Hg19::chr12:89992457..89992477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:89992457..89992477,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_at_chr12:89992457..89992477,- | |description=CAGE_peak_at_chr12:89992457..89992477,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002393!2.91e-11!9;CL:0002397!2.91e-11!9;CL:0002057!6.96e-10!42;CL:0000860!5.85e-09!45;CL:0000738!2.57e-08!140;CL:0002009!1.93e-07!65;CL:0000875!2.03e-07!3;CL:0002396!2.03e-07!3;CL:0002087!3.77e-07!119;CL:0002194!7.08e-07!63;CL:0000576!7.08e-07!63;CL:0000040!7.08e-07!63;CL:0000559!7.08e-07!63 | |ontology_enrichment_celltype=CL:0002393!2.91e-11!9;CL:0002397!2.91e-11!9;CL:0002057!6.96e-10!42;CL:0000860!5.85e-09!45;CL:0000738!2.57e-08!140;CL:0002009!1.93e-07!65;CL:0000875!2.03e-07!3;CL:0002396!2.03e-07!3;CL:0002087!3.77e-07!119;CL:0002194!7.08e-07!63;CL:0000576!7.08e-07!63;CL:0000040!7.08e-07!63;CL:0000559!7.08e-07!63 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.41e-16;1 | |ontology_enrichment_development_v019=UBERON:0006222;1.41e-16;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.86e-30!34;UBERON:0001869!1.39e-29!32;UBERON:0002780!9.15e-29!41;UBERON:0001890!9.15e-29!41;UBERON:0006240!9.15e-29!41;UBERON:0002791!2.64e-28!33;UBERON:0003080!6.46e-28!42;UBERON:0002020!2.66e-27!34;UBERON:0003528!2.66e-27!34;UBERON:0002619!3.53e-26!22;UBERON:0001049!5.16e-26!57;UBERON:0005068!5.16e-26!57;UBERON:0006241!5.16e-26!57;UBERON:0007135!5.16e-26!57;UBERON:0001950!8.88e-26!20;UBERON:0002616!7.45e-25!59;UBERON:0000955!1.20e-24!69;UBERON:0006238!1.20e-24!69;UBERON:0001017!1.34e-22!82;UBERON:0000956!1.42e-22!25;UBERON:0000203!1.42e-22!25;UBERON:0005743!4.04e-21!86;UBERON:0000073!1.74e-19!94;UBERON:0001016!1.74e-19!94;UBERON:0003056!1.39e-18!61;UBERON:0003075!4.04e-17!86;UBERON:0007284!4.04e-17!86;UBERON:0002346!5.58e-16!90;UBERON:0001872!2.60e-12!5;UBERON:0000033!4.57e-12!123;UBERON:0000153!4.20e-11!129;UBERON:0007811!4.20e-11!129;UBERON:0000200!3.66e-10!6;UBERON:0007023!4.74e-10!115;UBERON:0002420!5.66e-09!9;UBERON:0007245!5.66e-09!9;UBERON:0010009!5.66e-09!9;UBERON:0010011!5.66e-09!9;UBERON:0000454!5.66e-09!9;UBERON:0002771!1.68e-08!3;UBERON:0009663!2.80e-08!7;UBERON:0002021!3.76e-08!5;UBERON:0004121!1.16e-07!169;UBERON:0001871!1.99e-07!7;UBERON:0000924!2.70e-07!173;UBERON:0006601!2.70e-07!173 | |ontology_enrichment_uberon=UBERON:0001893!4.86e-30!34;UBERON:0001869!1.39e-29!32;UBERON:0002780!9.15e-29!41;UBERON:0001890!9.15e-29!41;UBERON:0006240!9.15e-29!41;UBERON:0002791!2.64e-28!33;UBERON:0003080!6.46e-28!42;UBERON:0002020!2.66e-27!34;UBERON:0003528!2.66e-27!34;UBERON:0002619!3.53e-26!22;UBERON:0001049!5.16e-26!57;UBERON:0005068!5.16e-26!57;UBERON:0006241!5.16e-26!57;UBERON:0007135!5.16e-26!57;UBERON:0001950!8.88e-26!20;UBERON:0002616!7.45e-25!59;UBERON:0000955!1.20e-24!69;UBERON:0006238!1.20e-24!69;UBERON:0001017!1.34e-22!82;UBERON:0000956!1.42e-22!25;UBERON:0000203!1.42e-22!25;UBERON:0005743!4.04e-21!86;UBERON:0000073!1.74e-19!94;UBERON:0001016!1.74e-19!94;UBERON:0003056!1.39e-18!61;UBERON:0003075!4.04e-17!86;UBERON:0007284!4.04e-17!86;UBERON:0002346!5.58e-16!90;UBERON:0001872!2.60e-12!5;UBERON:0000033!4.57e-12!123;UBERON:0000153!4.20e-11!129;UBERON:0007811!4.20e-11!129;UBERON:0000200!3.66e-10!6;UBERON:0007023!4.74e-10!115;UBERON:0002420!5.66e-09!9;UBERON:0007245!5.66e-09!9;UBERON:0010009!5.66e-09!9;UBERON:0010011!5.66e-09!9;UBERON:0000454!5.66e-09!9;UBERON:0002771!1.68e-08!3;UBERON:0009663!2.80e-08!7;UBERON:0002021!3.76e-08!5;UBERON:0004121!1.16e-07!169;UBERON:0001871!1.99e-07!7;UBERON:0000924!2.70e-07!173;UBERON:0006601!2.70e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;8.55e-32;2!UBERON:0001950;4.58e-26;20!UBERON:0002619;8.61e-24;22!UBERON:0000956;4.93e-21;25!UBERON:0000203;4.93e-21;25!UBERON:0002791;4.12e-20;32!UBERON:0001893;1.09e-19;34!UBERON:0001869;4.82e-19;32!UBERON:0003528;1.57e-17;34!UBERON:0002020;1.57e-17;34!UBERON:0001874;1.41e-16;1!UBERON:0003112;1.41e-16;1!UBERON:0011158;1.41e-16;1!UBERON:0003128;1.41e-16;1!UBERON:0001703;1.41e-16;1!UBERON:0002241;1.41e-16;1!UBERON:0000955;9.91e-16;68!UBERON:0002780;5.13e-15;41!UBERON:0001890;5.13e-15;41!UBERON:0000073;1.79e-14;53!UBERON:0002616;1.79e-14;53!UBERON:0002021;2.52e-13;5!UBERON:0001872;3.65e-13;5!UBERON:0000200;2.76e-11;6!UBERON:0001017;1.42e-10;75!UBERON:0001871;8.34e-10;6!UBERON:0001016;4.96e-09;83 | |ontology_enrichment_uberon_v019=UBERON:0002771;8.55e-32;2!UBERON:0001950;4.58e-26;20!UBERON:0002619;8.61e-24;22!UBERON:0000956;4.93e-21;25!UBERON:0000203;4.93e-21;25!UBERON:0002791;4.12e-20;32!UBERON:0001893;1.09e-19;34!UBERON:0001869;4.82e-19;32!UBERON:0003528;1.57e-17;34!UBERON:0002020;1.57e-17;34!UBERON:0001874;1.41e-16;1!UBERON:0003112;1.41e-16;1!UBERON:0011158;1.41e-16;1!UBERON:0003128;1.41e-16;1!UBERON:0001703;1.41e-16;1!UBERON:0002241;1.41e-16;1!UBERON:0000955;9.91e-16;68!UBERON:0002780;5.13e-15;41!UBERON:0001890;5.13e-15;41!UBERON:0000073;1.79e-14;53!UBERON:0002616;1.79e-14;53!UBERON:0002021;2.52e-13;5!UBERON:0001872;3.65e-13;5!UBERON:0000200;2.76e-11;6!UBERON:0001017;1.42e-10;75!UBERON:0001871;8.34e-10;6!UBERON:0001016;4.96e-09;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,8.57e-32,2;UBERON:0001950,6.52e-26,20;UBERON:0002619,1.19e-23,22;UBERON:0002780,1.08e-22,41;UBERON:0001890,1.08e-22,41;UBERON:0003080,1.08e-22,41;UBERON:0006240,1.08e-22,41;UBERON:0002791,3.05e-22,32;UBERON:0001869,3.05e-22,32;UBERON:0000073,4.02e-22,53;UBERON:0002616,4.02e-22,53;UBERON:0003528,5.95e-21,34;UBERON:0002020,5.95e-21,34;UBERON:0001893,5.95e-21,34;UBERON:0001049,6.37e-21,56;UBERON:0005068,6.37e-21,56;UBERON:0006241,6.37e-21,56;UBERON:0007135,6.37e-21,56;UBERON:0000955,6.40e-21,68;UBERON:0006238,6.40e-21,68;UBERON:0000956,6.54e-21,25;UBERON:0000203,6.54e-21,25;UBERON:0001017,1.64e-17,81;UBERON:0001874,8.86e-17,1;UBERON:0003112,2.63e-16,1;UBERON:0011158,2.63e-16,1;UBERON:0003128,2.63e-16,1;UBERON:0001703,2.63e-16,1;UBERON:0002241,2.63e-16,1;UBERON:0004761,2.63e-16,1;UBERON:0009617,2.63e-16,1;UBERON:0001016,1.03e-15,89;UBERON:0003056,3.42e-15,61;UBERON:0003075,3.89e-14,82;UBERON:0007284,3.89e-14,82;UBERON:0002346,1.89e-13,86;UBERON:0002021,2.85e-13,5;UBERON:0001872,5.27e-13,5;UBERON:0007023,1.65e-12,114;UBERON:0000200,2.76e-11,6;UBERON:0010371,5.26e-11,104;UBERON:0010314,1.51e-10,132;UBERON:0001871,8.35e-10,6;UBERON:0005253,8.09e-09,2;UBERON:0004121,7.63e-08,171;UBERON:0000924,7.63e-08,171;UBERON:0006601,7.63e-08,171;UBERON:0011216,4.48e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0,0,0.750884464207532,0,0.570025487482497,0.19891667719909,0.365328307529268,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.221158519862449,1.18219047581419,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87411556580271,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19954962921583,0.876336514945499,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,0,1.23069818544453,0.756215088665154,0.207471757392654,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,1.2401207790071,0.634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0,0,0.750884464207532,0,0.570025487482497,0.19891667719909,0.365328307529268,1.75996244461323,0,0.889509253863555,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48428957058962,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.221158519862449,1.18219047581419,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87411556580271,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19954962921583,0.876336514945499,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,0,1.23069818544453,0.756215088665154,0.207471757392654,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,1.2401207790071,0.634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:89992457..89992477,- | |short_description=p@chr12:89992457..89992477,- | ||
}} | }} |
Latest revision as of 13:18, 24 July 2015
Short description: | p@chr12:89992457..89992477, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:89992457..89992477, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data