FFCP PHASE1:Hg19::chr12:85819232..85819233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:85819232..85819233,+ | |||
|description=CAGE_peak_at_chr12:85819232..85819233,+ | |description=CAGE_peak_at_chr12:85819232..85819233,+ | ||
|id=chr12:85819232..85819233,+ | |id=chr12:85819232..85819233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.06e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.88e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.93e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!9.31e-21!143;DOID:305!1.67e-19!106;DOID:162!3.79e-15!235;DOID:14566!1.84e-14!239;DOID:3095!2.73e-13!22;DOID:2994!2.73e-13!22;DOID:171!2.32e-08!10;DOID:5409!2.50e-08!4;DOID:0050615!4.14e-08!16;DOID:169!6.75e-08!6;DOID:1324!6.61e-07!15;DOID:1325!9.63e-07!7;DOID:3904!9.63e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.75e-14;22!DOID:2994;9.75e-14;22!DOID:169;1.22e-13;6!DOID:171;1.32e-12;10!DOID:5409;4.82e-12;4!DOID:0050615;7.69e-11;16!DOID:305;5.15e-09;106!DOID:1324;2.81e-08;15!DOID:1325;4.53e-07;7!DOID:3904;4.53e-07;7!DOID:0050687;6.23e-07;143!DOID:1799;7.47e-07;1!DOID:10165;7.47e-07;1!DOID:1798;7.47e-07;1!DOID:5662;9.28e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.14e-24,143;DOID:305,3.12e-22,106;DOID:162,2.08e-19,235;DOID:14566,7.37e-19,239;DOID:3095,6.43e-14,22;DOID:2994,6.43e-14,22;DOID:169,6.94e-14,6;DOID:171,8.51e-13,10;DOID:5409,3.31e-12,4;DOID:0050615,6.87e-11,16;DOID:0050686,6.87e-09,137;DOID:1324,2.43e-08,15;DOID:1325,3.68e-07,7;DOID:3904,3.68e-07,7;DOID:1799,7.49e-07,1;DOID:10165,7.49e-07,1;DOID:1798,7.49e-07,1;DOID:5662,9.81e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.00e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.06e-09;5!UBERON:0002410;1.06e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.54e-10,5;UBERON:0002410,6.54e-10,5 | |||
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| ||
|short_description=p@chr12:85819232..85819233,+ | |short_description=p@chr12:85819232..85819233,+ | ||
}} | }} |
Latest revision as of 13:05, 24 July 2015
Short description: | p@chr12:85819232..85819233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:85819232..85819233, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.88e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.54e-10 | 5 |
autonomic nervous system | 6.54e-10 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.14e-24 | 143 |
carcinoma | 3.12e-22 | 106 |
cancer | 2.08e-19 | 235 |
disease of cellular proliferation | 7.37e-19 | 239 |
germ cell and embryonal cancer | 6.43e-14 | 22 |
germ cell cancer | 6.43e-14 | 22 |
neuroendocrine tumor | 6.94e-14 | 6 |
neuroectodermal tumor | 8.51e-13 | 10 |
lung small cell carcinoma | 3.31e-12 | 4 |
respiratory system cancer | 6.87e-11 | 16 |
organ system cancer | 6.87e-09 | 137 |
lung cancer | 2.43e-08 | 15 |
bronchus cancer | 3.68e-07 | 7 |
bronchogenic carcinoma | 3.68e-07 | 7 |
islet cell tumor | 7.49e-07 | 1 |
endocrine pancreas cancer | 7.49e-07 | 1 |
pancreatic endocrine carcinoma | 7.49e-07 | 1 |
pleomorphic carcinoma | 9.81e-07 | 1 |