FFCP PHASE1:Hg19::chr12:85380577..85380591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:85380577..85380591,+ | |||
|coexpression_cluster_id=C348 | |coexpression_cluster_id=C348 | ||
|description=CAGE_peak_at_chr12:85380577..85380591,+ | |description=CAGE_peak_at_chr12:85380577..85380591,+ | ||
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|ontology_enrichment_celltype=CL:0000148!7.67e-11!10;CL:0000541!7.67e-11!10;CL:0000147!4.03e-10!14 | |ontology_enrichment_celltype=CL:0000148!7.67e-11!10;CL:0000541!7.67e-11!10;CL:0000147!4.03e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.73e-45;10!CL:0000147;2.39e-32;14!CL:0002567;8.42e-25;3!CL:0000710;1.01e-22;20!CL:0002566;8.95e-20;1!CL:0000075;7.03e-17;27!CL:0002077;3.25e-12;34!CL:0002253;3.13e-10;2 | |ontology_enrichment_celltype_v019=CL:0000148;3.73e-45;10!CL:0000147;2.39e-32;14!CL:0002567;8.42e-25;3!CL:0000710;1.01e-22;20!CL:0002566;8.95e-20;1!CL:0000075;7.03e-17;27!CL:0002077;3.25e-12;34!CL:0002253;3.13e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.56e-45,10;CL:0000541,3.56e-45,10;CL:0000147,2.31e-32,14;CL:0002567,8.95e-25,3;CL:0000710,9.90e-23,20;CL:0002566,8.95e-20,1;CL:0000075,6.92e-17,27;CL:0002077,1.94e-13,34;CL:0000333,1.21e-10,41;CL:0002253,2.72e-10,2;CL:0000133,1.64e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.06e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;3.06e-07;3 | ||
|ontology_enrichment_disease=DOID:1909!1.53e-07!2 | |ontology_enrichment_disease=DOID:1909!1.53e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;4.73e-37;2 | |ontology_enrichment_disease_v019=DOID:1909;4.73e-37;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.69e-37,2 | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:85380577..85380591,+ | |short_description=p@chr12:85380577..85380591,+ | ||
}} | }} |
Latest revision as of 13:04, 24 July 2015
Short description: | p@chr12:85380577..85380591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:85380577..85380591, + |
Coexpression cluster: | C348_Melanocyte_melanoma_retina_cervical_eye_carcinoid_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.56e-45 | 10 |
melanoblast | 3.56e-45 | 10 |
pigment cell | 2.31e-32 | 14 |
light melanocyte | 8.95e-25 | 3 |
neurecto-epithelial cell | 9.90e-23 | 20 |
dark melanocyte | 8.95e-20 | 1 |
columnar/cuboidal epithelial cell | 6.92e-17 | 27 |
ecto-epithelial cell | 1.94e-13 | 34 |
migratory neural crest cell | 1.21e-10 | 41 |
epithelial cell of large intestine | 2.72e-10 | 2 |
neurectodermal cell | 1.64e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.69e-37 | 2 |