FFCP PHASE1:Hg19::chr12:76424595..76424611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76424595..76424611,+ | |||
|coexpression_cluster_id=C2242 | |coexpression_cluster_id=C2242 | ||
|description=CAGE_peak_at_chr12:76424595..76424611,+ | |description=CAGE_peak_at_chr12:76424595..76424611,+ | ||
|id=chr12:76424595..76424611,+ | |id=chr12:76424595..76424611,+ | ||
|ontology_enrichment_celltype=CL:0000220!2.05e-14!246;CL:0002321!2.29e-14!248;CL:0000055!7.75e-10!180;CL:0000221!1.08e-08!71;CL:0000066!4.71e-07!254 | |ontology_enrichment_celltype=CL:0000220!2.05e-14!246;CL:0002321!2.29e-14!248;CL:0000055!7.75e-10!180;CL:0000221!1.08e-08!71;CL:0000066!4.71e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.77e-09,250;CL:0000221,1.48e-07,72;CL:1000507,6.89e-07,10;CL:1000494,6.89e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!1.84e-15!612;UBERON:0002050!6.39e-15!605;UBERON:0005423!6.39e-15!605;UBERON:0000923!7.22e-15!604;UBERON:0005291!7.22e-15!604;UBERON:0006598!7.22e-15!604;UBERON:0002532!7.22e-15!604;UBERON:0000119!1.61e-13!312;UBERON:0000467!2.07e-13!625;UBERON:0000483!2.48e-13!309;UBERON:0000480!3.65e-13!626;UBERON:0000468!5.15e-13!659;UBERON:0000481!4.98e-11!347;UBERON:0000475!7.74e-11!365;UBERON:0000477!1.01e-10!286;UBERON:0004111!2.09e-10!241;UBERON:0003914!3.12e-09!118;UBERON:0005256!6.90e-09!143;UBERON:0001048!1.84e-07!168;UBERON:0000486!2.01e-07!82;UBERON:0000025!3.71e-07!194;UBERON:0000062!4.83e-07!511;UBERON:0005085!6.58e-07!29;UBERON:0002100!6.77e-07!216 | |ontology_enrichment_uberon=UBERON:0000922!1.84e-15!612;UBERON:0002050!6.39e-15!605;UBERON:0005423!6.39e-15!605;UBERON:0000923!7.22e-15!604;UBERON:0005291!7.22e-15!604;UBERON:0006598!7.22e-15!604;UBERON:0002532!7.22e-15!604;UBERON:0000119!1.61e-13!312;UBERON:0000467!2.07e-13!625;UBERON:0000483!2.48e-13!309;UBERON:0000480!3.65e-13!626;UBERON:0000468!5.15e-13!659;UBERON:0000481!4.98e-11!347;UBERON:0000475!7.74e-11!365;UBERON:0000477!1.01e-10!286;UBERON:0004111!2.09e-10!241;UBERON:0003914!3.12e-09!118;UBERON:0005256!6.90e-09!143;UBERON:0001048!1.84e-07!168;UBERON:0000486!2.01e-07!82;UBERON:0000025!3.71e-07!194;UBERON:0000062!4.83e-07!511;UBERON:0005085!6.58e-07!29;UBERON:0002100!6.77e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,4.02e-08,581;UBERON:0000119,8.56e-08,309;UBERON:0000922,1.75e-07,592;UBERON:0000483,1.84e-07,306;UBERON:0003102,1.97e-07,99;UBERON:0000486,2.43e-07,83;UBERON:0004810,6.89e-07,10 | |||
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| ||
|short_description=p@chr12:76424595..76424611,+ | |short_description=p@chr12:76424595..76424611,+ | ||
}} | }} |
Latest revision as of 12:26, 24 July 2015
Short description: | p@chr12:76424595..76424611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76424595..76424611, + |
Coexpression cluster: | C2242_Mammary_Keratinocyte_Trabecular_Nucleus_salivary_Prostate_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.77e-09 | 250 |
ectodermal cell | 1.48e-07 | 72 |
kidney tubule cell | 6.89e-07 | 10 |
nephron tubule epithelial cell | 6.89e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 4.02e-08 | 581 |
cell layer | 8.56e-08 | 309 |
embryo | 1.75e-07 | 592 |
epithelium | 1.84e-07 | 306 |
surface structure | 1.97e-07 | 99 |
multilaminar epithelium | 2.43e-07 | 83 |
nephron tubule epithelium | 6.89e-07 | 10 |