FFCP PHASE1:Hg19::chr12:76424402..76424485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76424402..76424485,+ | |||
|coexpression_cluster_id=C2242 | |||
|description=CAGE_peak_at_chr12:76424402..76424485,+ | |description=CAGE_peak_at_chr12:76424402..76424485,+ | ||
|id=chr12:76424402..76424485,+ | |id=chr12:76424402..76424485,+ | ||
|ontology_enrichment_celltype=CL:0000220!9.84e-18!246;CL:0002321!1.78e-17!248;CL:0000055!1.36e-15!180;CL:0002371!1.01e-10!591;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000012!4.88e-09!682;CL:0000144!9.24e-09!625;CL:0000066!1.15e-07!254;CL:0002076!1.48e-07!43;CL:0000221!5.78e-07!71;CL:0000192!7.49e-07!42;CL:0000514!7.49e-07!42;CL:0000183!9.14e-07!59 | |ontology_enrichment_celltype=CL:0000220!9.84e-18!246;CL:0002321!1.78e-17!248;CL:0000055!1.36e-15!180;CL:0002371!1.01e-10!591;CL:0000548!1.49e-09!679;CL:0000004!1.49e-09!679;CL:0000255!1.49e-09!679;CL:0000012!4.88e-09!682;CL:0000144!9.24e-09!625;CL:0000066!1.15e-07!254;CL:0002076!1.48e-07!43;CL:0000221!5.78e-07!71;CL:0000192!7.49e-07!42;CL:0000514!7.49e-07!42;CL:0000183!9.14e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.73e-14,250;CL:0002076,1.76e-07,42;CL:0000221,2.43e-07,72;CL:0000066,3.08e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!4.02e-14!625;UBERON:0000922!6.03e-14!612;UBERON:0000480!7.83e-14!626;UBERON:0000923!1.65e-13!604;UBERON:0005291!1.65e-13!604;UBERON:0006598!1.65e-13!604;UBERON:0002532!1.65e-13!604;UBERON:0000468!1.66e-13!659;UBERON:0002050!3.14e-13!605;UBERON:0005423!3.14e-13!605;UBERON:0000475!5.08e-11!365;UBERON:0000119!1.41e-10!312;UBERON:0000483!2.94e-10!309;UBERON:0000481!1.08e-09!347;UBERON:0003102!2.72e-09!95;UBERON:0001444!6.27e-09!48;UBERON:0003914!7.88e-09!118;UBERON:0005256!8.46e-09!143;UBERON:0000477!8.74e-09!286;UBERON:0002049!2.95e-08!79;UBERON:0007798!2.95e-08!79;UBERON:0001637!6.70e-08!42;UBERON:0003509!6.70e-08!42;UBERON:0004572!6.70e-08!42;UBERON:0004111!7.76e-08!241;UBERON:0000914!1.21e-07!83;UBERON:0002329!1.21e-07!83;UBERON:0003077!1.21e-07!83;UBERON:0003059!1.21e-07!83;UBERON:0007282!1.21e-07!83;UBERON:0009618!1.21e-07!83;UBERON:0007285!1.21e-07!83;UBERON:0000486!1.33e-07!82;UBERON:0000490!3.62e-07!138;UBERON:0004573!3.82e-07!33;UBERON:0004571!3.82e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001444;2.64e-07;48!UBERON:0000165;5.67e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,3.68e-10,592;UBERON:0005423,7.86e-10,581;UBERON:0000033,1.78e-09,56;UBERON:0001444,4.28e-09,49;UBERON:0002050,1.45e-08,564;UBERON:0000923,1.97e-08,560;UBERON:0010316,1.97e-08,560;UBERON:0005291,1.97e-08,560;UBERON:0006598,1.97e-08,560;UBERON:0010317,1.97e-08,560;UBERON:0002532,1.97e-08,560;UBERON:0003102,2.75e-08,99;UBERON:0000153,8.44e-08,62;UBERON:0007811,8.44e-08,62;UBERON:0003914,2.01e-07,117;UBERON:0000119,3.07e-07,309;UBERON:0002049,4.12e-07,78;UBERON:0007798,4.12e-07,78;UBERON:0000483,5.19e-07,306;UBERON:0000486,5.44e-07,83;UBERON:0000165,6.36e-07,29;UBERON:0000930,6.36e-07,29;UBERON:0001637,6.77e-07,42;UBERON:0003509,6.77e-07,42;UBERON:0004572,6.77e-07,42 | |||
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| ||
|short_description=p@chr12:76424402..76424485,+ | |short_description=p@chr12:76424402..76424485,+ | ||
}} | }} |
Latest revision as of 12:26, 24 July 2015
Short description: | p@chr12:76424402..76424485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76424402..76424485, + |
Coexpression cluster: | C2242_Mammary_Keratinocyte_Trabecular_Nucleus_salivary_Prostate_Skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.73e-14 | 250 |
endo-epithelial cell | 1.76e-07 | 42 |
ectodermal cell | 2.43e-07 | 72 |
epithelial cell | 3.08e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
embryo | 3.68e-10 | 592 |
developing anatomical structure | 7.86e-10 | 581 |
head | 1.78e-09 | 56 |
subdivision of head | 4.28e-09 | 49 |
embryonic structure | 1.45e-08 | 564 |
germ layer | 1.97e-08 | 560 |
germ layer / neural crest | 1.97e-08 | 560 |
embryonic tissue | 1.97e-08 | 560 |
presumptive structure | 1.97e-08 | 560 |
germ layer / neural crest derived structure | 1.97e-08 | 560 |
epiblast (generic) | 1.97e-08 | 560 |
surface structure | 2.75e-08 | 99 |
anterior region of body | 8.44e-08 | 62 |
craniocervical region | 8.44e-08 | 62 |
epithelial tube | 2.01e-07 | 117 |
cell layer | 3.07e-07 | 309 |
vasculature | 4.12e-07 | 78 |
vascular system | 4.12e-07 | 78 |
epithelium | 5.19e-07 | 306 |
multilaminar epithelium | 5.44e-07 | 83 |
mouth | 6.36e-07 | 29 |
stomodeum | 6.36e-07 | 29 |
artery | 6.77e-07 | 42 |
arterial blood vessel | 6.77e-07 | 42 |
arterial system | 6.77e-07 | 42 |