FFCP PHASE1:Hg19::chr12:76175239..76175250,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:76175239..76175250,- | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr12:76175239..76175250,- | |description=CAGE_peak_at_chr12:76175239..76175250,- | ||
|id=chr12:76175239..76175250,- | |id=chr12:76175239..76175250,- | ||
|ontology_enrichment_celltype=CL:0002594!5.31e-15!4;CL:0002621!1.89e-09!3;CL:0000359!4.75e-09!32;CL:0002174!7.26e-08!1;CL:0000501!7.26e-08!1;CL:1000306!1.39e-07!4;CL:0002547!1.39e-07!4;CL:0002557!1.69e-07!1;CL:0000342!2.04e-07!1;CL:0002565!2.04e-07!1;CL:0000569!2.25e-07!4;CL:0000011!2.25e-07!4 | |ontology_enrichment_celltype=CL:0002594!5.31e-15!4;CL:0002621!1.89e-09!3;CL:0000359!4.75e-09!32;CL:0002174!7.26e-08!1;CL:0000501!7.26e-08!1;CL:1000306!1.39e-07!4;CL:0002547!1.39e-07!4;CL:0002557!1.69e-07!1;CL:0000342!2.04e-07!1;CL:0002565!2.04e-07!1;CL:0000569!2.25e-07!4;CL:0000011!2.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002589;5.96e-34;2!CL:1000306;7.35e-18;4!CL:0002547;7.35e-18;4!CL:0000569;9.45e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.04e-34,2;CL:1000306,7.35e-18,4;CL:0002547,7.35e-18,4;CL:0000569,1.03e-17,4;CL:0000011,1.03e-17,4 | |||
|ontology_enrichment_development_v019=CL:0000011;9.45e-18;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!5.31e-15!4;UBERON:0004535!1.52e-11!110;UBERON:0001009!3.76e-11!113;UBERON:0001637!5.29e-11!42;UBERON:0003509!5.29e-11!42;UBERON:0004572!5.29e-11!42;UBERON:0004872!2.29e-10!84;UBERON:0001949!1.89e-09!3;UBERON:0002049!2.51e-09!79;UBERON:0007798!2.51e-09!79;UBERON:0003914!3.52e-09!118;UBERON:0000415!1.39e-07!4;UBERON:0007240!1.39e-07!4;UBERON:0005742!1.39e-07!4;UBERON:0005734!1.39e-07!4;UBERON:0004664!1.39e-07!4;UBERON:0004663!1.39e-07!4;UBERON:0001828!1.53e-07!8;UBERON:0001282!1.58e-07!1;UBERON:0009842!1.58e-07!1;UBERON:0003704!1.58e-07!1;UBERON:0001171!1.58e-07!1;UBERON:0001172!1.58e-07!1;UBERON:0002506!2.04e-07!1;UBERON:0001769!2.04e-07!1;UBERON:0001981!2.91e-07!60;UBERON:0007500!2.91e-07!60;UBERON:0004537!2.91e-07!60;UBERON:0006965!2.91e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;5.96e-34;2!UBERON:0007204;5.96e-34;2!UBERON:0004797;7.35e-18;4!UBERON:0000415;7.35e-18;4!UBERON:0007240;7.35e-18;4!UBERON:0005742;7.35e-18;4!UBERON:0005734;7.35e-18;4!UBERON:0004664;7.35e-18;4!UBERON:0004663;7.35e-18;4!UBERON:0004573;2.18e-08;33!UBERON:0004571;2.18e-08;33!UBERON:0001637;4.38e-07;42!UBERON:0003509;4.38e-07;42!UBERON:0004572;4.38e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.04e-34,2;UBERON:0007204,5.04e-34,2;UBERON:0000415,7.35e-18,4;UBERON:0007240,7.35e-18,4;UBERON:0005742,7.35e-18,4;UBERON:0005734,7.35e-18,4;UBERON:0004664,7.35e-18,4;UBERON:0004663,7.35e-18,4;UBERON:0004797,8.16e-11,7;UBERON:0004573,3.79e-09,33;UBERON:0004571,3.79e-09,33;UBERON:0004872,3.31e-08,83;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42 | |||
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|short_description=p@chr12:76175239..76175250,- | |short_description=p@chr12:76175239..76175250,- | ||
}} | }} |
Latest revision as of 12:25, 24 July 2015
Short description: | p@chr12:76175239..76175250, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76175239..76175250, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.04e-34 | 2 |
fibroblast of tunica adventitia of artery | 7.35e-18 | 4 |
fibroblast of the aortic adventitia | 7.35e-18 | 4 |
cardiac mesenchymal cell | 1.03e-17 | 4 |
migratory trunk neural crest cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.04e-34 | 2 |
brachiocephalic vasculature | 5.04e-34 | 2 |
artery wall | 7.35e-18 | 4 |
tunica adventitia of artery | 7.35e-18 | 4 |
adventitia | 7.35e-18 | 4 |
tunica adventitia of blood vessel | 7.35e-18 | 4 |
aorta tunica adventitia | 7.35e-18 | 4 |
aorta wall | 7.35e-18 | 4 |
blood vessel layer | 8.16e-11 | 7 |
systemic artery | 3.79e-09 | 33 |
systemic arterial system | 3.79e-09 | 33 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
artery | 2.04e-07 | 42 |
arterial blood vessel | 2.04e-07 | 42 |
arterial system | 2.04e-07 | 42 |