FFCP PHASE1:Hg19::chr12:75893255..75893266,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:75893255..75893266,+
|short_description=p4@U00943
|description=CAGE_peak_4_at_U00943_5end
|association_with_transcript=-24bp_to_U00943_5end
|EntrezGene=
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_U00943_5end | |||
|cluster_id=chr12:75893255..75893266,+ | |||
|description=CAGE_peak_4_at_U00943_5end | |||
|id=chr12:75893255..75893266,+ | |||
|ontology_enrichment_celltype=CL:0000048!8.50e-12!430;CL:0000723!4.67e-11!436;CL:0000034!4.06e-10!444;CL:0002009!5.95e-10!65;CL:0002194!6.37e-10!63;CL:0000576!6.37e-10!63;CL:0000040!6.37e-10!63;CL:0000559!6.37e-10!63;CL:0002057!1.44e-09!42;CL:0002320!4.67e-09!365;CL:0000144!8.88e-09!625;CL:0000134!9.51e-09!358;CL:0002371!2.04e-08!591;CL:0000860!2.36e-08!45;CL:0000557!3.62e-08!71;CL:0000766!6.51e-08!76;CL:0000839!7.63e-08!70;CL:0000219!2.26e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.75e-10;3!CL:0000342;6.40e-08;1!CL:0002565;6.40e-08;1!CL:0000473;3.38e-07;39!CL:0000234;3.38e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.75e-10,3;CL:0000342,1.14e-07,1;CL:0002565,1.14e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.24e-21;3!DOID:127;3.24e-21;3!DOID:0060072;4.64e-16;4!DOID:4235;6.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.40e-21,3;DOID:127,2.40e-21,3;DOID:0060072,3.71e-16,4;DOID:4235,8.69e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.80e-11!167;UBERON:0002371!2.09e-09!80;UBERON:0002390!9.11e-09!102;UBERON:0003061!9.11e-09!102;UBERON:0004765!1.07e-08!101;UBERON:0001434!1.07e-08!101;UBERON:0002384!1.07e-08!375;UBERON:0001474!2.51e-08!86;UBERON:0002193!3.27e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;6.40e-08;1!UBERON:0001769;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,1.14e-07,1;UBERON:0001769,1.14e-07,1 | |||
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| ||
|short_description=p4@U00943 | |||
}} | }} |
Latest revision as of 12:24, 24 July 2015
Short description: | p4@U00943 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_U00943_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_U00943_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.75e-10 | 3 |
pigment cell (sensu Vertebrata) | 1.14e-07 | 1 |
iris pigment epithelial cell | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 1.14e-07 | 1 |
iris | 1.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.40e-21 | 3 |
leiomyoma | 2.40e-21 | 3 |
benign neoplasm | 3.71e-16 | 4 |
spindle cell sarcoma | 8.69e-08 | 1 |