FFCP PHASE1:Hg19::chr12:7187896..7187912,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:7187896..7187912,- to FFCP PHASE1:Hg19::chr12:7187896..7187912,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:7187896..7187912,- | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_at_chr12:7187896..7187912,- | |||
|id=chr12:7187896..7187912,- | |||
|ontology_enrichment_celltype=CL:0000055!9.73e-17!180;CL:0000057!8.60e-12!75;CL:0000680!4.46e-09!57;CL:0000056!4.46e-09!57;CL:0000355!4.46e-09!57;CL:0000187!4.73e-09!54;CL:0000183!1.13e-08!59;CL:0000393!3.89e-08!60;CL:0000211!3.89e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.63e-09;13!CL:0000499;2.84e-09;28!CL:0000153;2.24e-08;9!CL:0000447;2.24e-08;9!CL:0000187;1.84e-07;55!CL:0000327;6.12e-07;15!CL:0000192;9.73e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,6.18e-12,55;CL:0000680,6.32e-11,58;CL:0000056,6.32e-11,58;CL:0000355,6.32e-11,58;CL:0000393,5.05e-10,61;CL:0000211,5.05e-10,61;CL:0000136,1.18e-09,15;CL:0000499,1.60e-09,28;CL:0000192,1.01e-08,43;CL:0000514,1.01e-08,43;CL:0000153,1.74e-08,9;CL:0000447,1.74e-08,9;CL:0000048,2.59e-08,427;CL:0000723,6.96e-08,433;CL:0000034,2.46e-07,441;CL:0000327,4.01e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;9.73e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.76e-09!63;UBERON:0001015!2.76e-09!63;UBERON:0000383!2.76e-09!63;UBERON:0005256!8.97e-09!143;UBERON:0001134!1.15e-08!61;UBERON:0002036!1.15e-08!61;UBERON:0003082!1.15e-08!61;UBERON:0000475!5.28e-08!365;UBERON:0004290!2.16e-07!70;UBERON:0002100!3.09e-07!216;UBERON:0000914!4.27e-07!83;UBERON:0002329!4.27e-07!83;UBERON:0003077!4.27e-07!83;UBERON:0003059!4.27e-07!83;UBERON:0007282!4.27e-07!83;UBERON:0009618!4.27e-07!83;UBERON:0007285!4.27e-07!83;UBERON:0000486!8.74e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001135;6.87e-09;15!UBERON:0004457;3.51e-08;9!UBERON:0000042;3.51e-08;9!UBERON:0002107;1.19e-07;19!UBERON:0006925;1.19e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.81e-12,122;UBERON:0003104,2.81e-12,160;UBERON:0009142,2.81e-12,160;UBERON:0002385,4.09e-10,64;UBERON:0001015,4.09e-10,64;UBERON:0000383,4.09e-10,64;UBERON:0001134,9.60e-10,62;UBERON:0002036,9.60e-10,62;UBERON:0003082,9.60e-10,62;UBERON:0001135,5.84e-09,15;UBERON:0007524,8.88e-09,73;UBERON:0002100,2.10e-08,199;UBERON:0002329,2.49e-08,71;UBERON:0003059,2.49e-08,71;UBERON:0007282,2.49e-08,71;UBERON:0004290,2.49e-08,71;UBERON:0009618,2.49e-08,71;UBERON:0003077,4.08e-08,72;UBERON:0007285,4.08e-08,72;UBERON:0002107,1.05e-07,19;UBERON:0006925,1.05e-07,19;UBERON:0008836,1.05e-07,19;UBERON:0000486,1.07e-07,83;UBERON:0007503,5.87e-07,78 | |||
|phase1_expression=3.27021082687002,5.1384125733836,2.81908808191942,12.0087958023756,9.38618298297304,6.97870819280295,5.06599756336621,2.52687949370732,3.13422753839806,0.245733936501509,0,0,0,0.495065411840187,0.994192127183747,2.01697543935533,1.20538905604795,2.92124036154949,1.46379839637152,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,1.02290049474824,2.53007406669196,3.00802746381534,5.5041677205113,1.5905718941022,3.89307896242109,0.0945348171640679,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.886413581652058,0.794455084879313,15.2023408996871,2.12801029319014,0.560677600142307,2.1349799145941,0,0,0.269421344139376,0.653847612453835,0.302714855289863,1.72852777344,0,0,0,0.448346041655403,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,7.12801714369232,6.42894016124248,0,0,0.168336113954066,0,0,0,0.919463387397059,1.05166641234618,0.226864366320042,0.717558542755448,3.20336083227851,2.96704661623387,0.900273288253207,0.412210116953756,1.03056216018252,0.744467425326359,1.85653965465393,0.292311015483596,1.00973509697646,2.66944706062668,2.42469085228218,0.710019185033229,0.10075209822764,0.508681776931463,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,2.3218396401599,0.721879481669586,0.236613600079688,0,0.241011029883482,0.441175890929576,0.217879444092406,0,0.404493924480493,0,0,0,0,1.6462960453256,1.47008711385542,62.1099670626971,48.1585336172037,32.4934448674772,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,2.32689088364,0,0,0.26593811658487,0,0.771622122786426,0,0,2.85955987316295,1.08524321078289,0,0,1.06617584622764,1.58390374586686,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0.749007023947182,0,0,2.20844685094452,1.00034104211935,0.542530047399471,2.9115920614313,4.28229573113188,0.473107245101804,4.09994952474496,1.80567659836631,0,2.0694614258501,0,0.184369168541703,0.955719759148911,0.783204629850962,2.05886054286514,0,0,0,0,0,0,0.744323423456331,1.53461973288062,0.841980283299221,1.79394808957981,0,1.28683136914886,5.93672265779964,0.462629081407967,0.355123450626254,0.574890092096664,1.03850885836724,0.232420756919918,0,0,0,1.83703117063371,2.1850940160806,3.67148361886388,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,1.23649213977267,0,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,1.22802939780904,0,1.39646318328756,1.45016693914229,0.511359764496605,1.78064071293475,0,0,0,0,0,2.51849877464512,0,1.23213432070436,0,1.73986598415015,0,0,0.372158369359667,0.632758849437452,1.14378116354295,1.535386747868,4.2793898803392,0.636406495851874,1.56989728039846,1.43897966066652,2.19629623788844,1.17812402345686,0,0,0.421258456238981,1.46290121726877,4.6305563029944,0,1.36499911407986,2.2624869112594,1.13008116620243,0,0.66343897524122,0.438450885253763,3.47265320560013,1.31178950409327,0,0,0,0,0.0982490410131212,0,0.709522128141196,13.9331039296458,30.6244250452709,0.75894634753143,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.667852230137435,0,0,1.19548792950642,0.828851746593443,0,0.20453736500431,0,0.622079175323615,0,0.179021174675609,0,1.08507746200627,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0,0,0.10893846351899,0,0.692552326534174,3.53220373125704,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0.293977192243133,0,2.79562669187248,0,0,0,0,0,0,1.35588444468319,0,0,0.0633107959558787,0,0.400794101257669,0.640358984218058,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.209205692624666,0.713987523454252,0,0,0.136905378891993,0,1.71906176567983,0,4.74780082162832,0,2.15361907373044,0.599037001496973,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,0.709251365692784,0.157363764404994,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0,0,0.979762080328227,0,0,1.5334921960688,0.339936274560377,3.95691030930823,1.32506888912221,0,0.26446520348538,0,0,0.320362237703084,0.314408610199332,0.414239055347196,1.9846640872478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| 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| ||
|short_description=p@chr12:7187896..7187912,- | |||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7187896..7187912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7187896..7187912, - |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 6.18e-12 | 55 |
muscle precursor cell | 6.32e-11 | 58 |
myoblast | 6.32e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.32e-11 | 58 |
electrically responsive cell | 5.05e-10 | 61 |
electrically active cell | 5.05e-10 | 61 |
fat cell | 1.18e-09 | 15 |
stromal cell | 1.60e-09 | 28 |
smooth muscle cell | 1.01e-08 | 43 |
smooth muscle myoblast | 1.01e-08 | 43 |
GAG secreting cell | 1.74e-08 | 9 |
carbohydrate secreting cell | 1.74e-08 | 9 |
multi fate stem cell | 2.59e-08 | 427 |
somatic stem cell | 6.96e-08 | 433 |
stem cell | 2.46e-07 | 441 |
extracellular matrix secreting cell | 4.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.81e-12 | 122 |
mesenchyme | 2.81e-12 | 160 |
entire embryonic mesenchyme | 2.81e-12 | 160 |
muscle tissue | 4.09e-10 | 64 |
musculature | 4.09e-10 | 64 |
musculature of body | 4.09e-10 | 64 |
skeletal muscle tissue | 9.60e-10 | 62 |
striated muscle tissue | 9.60e-10 | 62 |
myotome | 9.60e-10 | 62 |
smooth muscle tissue | 5.84e-09 | 15 |
dense mesenchyme tissue | 8.88e-09 | 73 |
trunk | 2.10e-08 | 199 |
somite | 2.49e-08 | 71 |
presomitic mesoderm | 2.49e-08 | 71 |
presumptive segmental plate | 2.49e-08 | 71 |
dermomyotome | 2.49e-08 | 71 |
trunk paraxial mesoderm | 2.49e-08 | 71 |
paraxial mesoderm | 4.08e-08 | 72 |
presumptive paraxial mesoderm | 4.08e-08 | 72 |
liver | 1.05e-07 | 19 |
digestive gland | 1.05e-07 | 19 |
liver bud | 1.05e-07 | 19 |
multilaminar epithelium | 1.07e-07 | 83 |
epithelial vesicle | 5.87e-07 | 78 |