FFCP PHASE1:Hg19::chr12:7177786..7177801,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7177786..7177801,+ | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_at_chr12:7177786..7177801,+ | |description=CAGE_peak_at_chr12:7177786..7177801,+ | ||
|id=chr12:7177786..7177801,+ | |id=chr12:7177786..7177801,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.47e-11!75;CL:0000055!1.52e-08!180;CL:0002334!8.48e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.47e-11!75;CL:0000055!1.52e-08!180;CL:0002334!8.48e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000499;1.24e-12;28!CL:0000153;1.30e-10;9!CL:0000447;1.30e-10;9!CL:0000136;6.67e-09;13!CL:0000138;2.45e-08;6!CL:0000135;1.69e-07;3!CL:0000388;1.69e-07;3!CL:0000327;2.16e-07;15!CL:0002615;7.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,1.18e-12,28;CL:0000136,3.51e-11,15;CL:0000153,9.59e-11,9;CL:0000447,9.59e-11,9;CL:0000058,1.76e-08,6;CL:0000138,1.76e-08,6;CL:0000135,1.69e-07,3;CL:0000388,1.69e-07,3;CL:0000327,1.71e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.39e-07!14 | |ontology_enrichment_disease=DOID:2394!2.39e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.46e-13;9!UBERON:0000042;3.46e-13;9!UBERON:0003688;3.83e-11;6!UBERON:0002358;3.83e-11;6!UBERON:0003684;3.83e-11;6!UBERON:0001178;3.83e-11;6!UBERON:0002107;6.16e-08;19!UBERON:0006925;6.16e-08;19!UBERON:0007846;1.69e-07;3!UBERON:0000043;1.69e-07;3!UBERON:0007845;1.69e-07;3!UBERON:0001013;2.09e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.16e-11,6;UBERON:0002358,6.16e-11,6;UBERON:0003684,6.16e-11,6;UBERON:0001178,6.16e-11,6;UBERON:0004457,2.49e-09,12;UBERON:0000042,2.49e-09,12;UBERON:0002107,6.79e-08,19;UBERON:0006925,6.79e-08,19;UBERON:0008836,6.79e-08,19;UBERON:0007846,1.69e-07,3;UBERON:0000043,1.69e-07,3;UBERON:0007845,1.69e-07,3;UBERON:0001013,4.29e-07,14 | |||
|phase1_expression=3.27021082687002,8.77812147953031,1.12763523276777,10.007329835313,8.04529969969118,6.97870819280295,0,1.26343974685366,4.17897005119742,0,0,0,0,0,0.662794751455832,5.3786011716142,1.80808358407193,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.12786256184353,2.89151321907653,3.00802746381534,3.91085601194224,1.5905718941022,9.24606253575008,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.506522046658319,0.662045904066094,11.4734648299525,1.06400514659507,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.653847612453835,0.302714855289863,0,0.234321431833797,0,0,0.448346041655403,0,0,0,0,0.122834317311768,0.619954687054593,1.18800285728205,3.70900393917835,0,0,0,0,0,1.75591048352335,0.612975591598039,1.05166641234618,0,0.538168907066586,2.13557388818567,0.635795703478686,0,0.515262646192195,1.28820270022815,0.18611685633159,0.843881661206331,0.876933046450788,1.51460264546469,0.920498986422993,4.68773564774555,1.06502877754984,0.302256294682921,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,2.78620756819187,1.44375896333917,0.236613600079688,0.674338760312407,0,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0.4115740113314,0,46.8993628840774,29.4848165003288,7.68026878685825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.904902010304444,0,0,0.26593811658487,0,0,0,0,1.00084595560703,0,0,0,1.06617584622764,0,1.20575750823834,0.871533458600294,2.0994328148232,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,0.500170521059677,0,3.53550464602372,4.99601168632053,2.68094105557689,2.10854546986884,0.300946099727719,2.27407504055985,0,0,0,1.12948698808508,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,2.52594084989766,1.02511319404561,2.04682899626681,1.93024705372329,4.45254199334973,0.462629081407967,1.24293207719189,0,1.03850885836724,0.813472649219715,0,0,0,1.37777337797528,2.1850940160806,9.30983346211911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.9273691048295,0,0,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0,0.429680979473094,0.580066775656914,0.0852266274161009,0.445160178233687,0,0,0,0,0.464845549297286,1.5740617341532,0,0.308033580176089,0,0,0,0,0.372158369359667,0,1.33441135746677,0,0.855877976067841,0,0,1.07923474549989,1.64722217841633,0.589062011728432,0,0,0,0,9.99225307488266,0,0.545999645631943,3.53513579884282,2.26016233240486,0,1.32687795048244,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,9.49984358839489,17.1233344339149,0,0.349934720244983,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,0,0,0.281338832821026,0,0,0,2.59022384726391,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.769502585037971,1.82307289355202,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.92199335066233,0,0,0,0,0.290967049465258,0,1.58186518546373,0,0,0,0,0.240476460754601,1.06726497369676,0.39961921916426,0.144090417154106,0,0,0,0,0,0.135904206073614,0.209205692624666,0.305994652908965,0,0,0.136905378891993,0,1.71906176567983,0,1.39641200636127,0.916641696046735,0,0,1.28767814440971,0.223171457441873,0.134366944973453,1.44119953416961,0,0,0.164831716762333,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,1.63293680054705,0,0,0.340776043570843,0,2.34483573884932,1.32506888912221,0,0.26446520348538,0,0,0.320362237703084,0,1.24271716604159,1.48849806543585,0,0,0,0,0,0.612691153526923,0,0,0,0.366078794705889,0,0,0.332787154610557,0.124192805882767,0,0,0,0,1.17632909849086,0,0,0.298509605773748,1.16856654923612,1.10961172300523,0.568209015825267,3.52195062453605,2.66943366478961,1.37304041038154,3.17584939902802,0.777186002913902,1.62640664988597,0.63718706865481,0.449803112163605,0.465788870628778,0.829412415681711,1.06336685823198,0.521745061811734,3.00515217994437,1.52322084867518,1.62748293281865,0.545545977607678,1.39633724155235,0.928067519756987,0.796191777397232,0,2.06037423109676,1.01024846629776,0,0,0.214441591374926,0.521988583930423,0.90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| ||
|short_description=p@chr12:7177786..7177801,+ | |short_description=p@chr12:7177786..7177801,+ | ||
}} | }} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7177786..7177801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7177786..7177801, + |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 1.18e-12 | 28 |
fat cell | 3.51e-11 | 15 |
GAG secreting cell | 9.59e-11 | 9 |
carbohydrate secreting cell | 9.59e-11 | 9 |
chondroblast | 1.76e-08 | 6 |
chondrocyte | 1.76e-08 | 6 |
fibrocyte | 1.69e-07 | 3 |
tendon cell | 1.69e-07 | 3 |
extracellular matrix secreting cell | 1.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.16e-11 | 6 |
peritoneum | 6.16e-11 | 6 |
abdominal cavity | 6.16e-11 | 6 |
visceral peritoneum | 6.16e-11 | 6 |
cavity lining | 2.49e-09 | 12 |
serous membrane | 2.49e-09 | 12 |
liver | 6.79e-08 | 19 |
digestive gland | 6.79e-08 | 19 |
liver bud | 6.79e-08 | 19 |
dense regular connective tissue | 1.69e-07 | 3 |
tendon | 1.69e-07 | 3 |
regular connective tissue | 1.69e-07 | 3 |
adipose tissue | 4.29e-07 | 14 |