FFCP PHASE1:Hg19::chr12:7177634..7177646,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:7177634..7177646,+ | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_at_chr12:7177634..7177646,+ | |||
|id=chr12:7177634..7177646,+ | |||
|ontology_enrichment_celltype=CL:0000153!4.04e-08!9;CL:0000447!4.04e-08!9;CL:0000055!1.02e-07!180;CL:0000667!4.01e-07!6;CL:0000058!4.01e-07!6;CL:0000138!4.01e-07!6;CL:0000057!4.12e-07!75;CL:0000499!6.72e-07!27;CL:0002334!7.60e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000153;5.68e-21;9!CL:0000447;5.68e-21;9!CL:0000138;3.05e-16;6!CL:0000499;2.85e-15;28!CL:0000135;2.66e-13;3!CL:0000388;2.66e-13;3!CL:0000327;3.52e-12;15!CL:0000136;9.73e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.33e-21,9;CL:0000447,7.33e-21,9;CL:0000058,4.11e-16,6;CL:0000138,4.11e-16,6;CL:0000499,3.12e-15,28;CL:0000135,2.33e-13,3;CL:0000388,2.33e-13,3;CL:0000327,4.07e-12,15;CL:0000136,9.74e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!4.65e-08!12;UBERON:0000042!4.65e-08!12;UBERON:0002100!8.45e-08!216;UBERON:0005256!1.18e-07!143;UBERON:0004458!2.56e-07!49;UBERON:0003688!4.06e-07!6;UBERON:0002358!4.06e-07!6;UBERON:0003684!4.06e-07!6;UBERON:0001178!4.06e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.66e-13;3!UBERON:0000043;2.66e-13;3!UBERON:0007845;2.66e-13;3!UBERON:0004457;2.34e-11;9!UBERON:0000042;2.34e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.33e-13,3;UBERON:0000043,2.33e-13,3;UBERON:0007845,2.33e-13,3;UBERON:0004457,1.95e-08,12;UBERON:0000042,1.95e-08,12 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0.845726424575827,4.00293193412522,4.02264984984559,5.23403114460221,0,0.631719873426831,1.82829939739887,0,0,0,0,0,0,2.01697543935533,1.20538905604795,0,0.487932798790507,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.44575660953827,1.00267582127178,1.30361867064741,2.3858578411533,3.40644409211845,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,1.43418310374407,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,3.21447008062124,0,0,0,0,0,0,0.30648779579902,1.05166641234618,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.368199594569197,1.13152239773168,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0.118306800039844,0,0,0.220587945464788,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,20.2808055714929,11.7939266001315,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0.845302752556,0,0,0,0,0,1.14382394926518,1.08524321078289,0,0,0.355391948742546,0,0.904318131178758,0,1.09970290300263,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.24782516918484,3.56857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.96462066103151,0.256278298511402,0.511707249066704,1.28683136914886,0,0.154209693802656,0.532685175939381,0,1.03850885836724,0.116210378459959,0,0,0,0.803701137152247,0.546273504020151,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.429680979473094,0,0,0.178064071293475,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0.78494864019923,0.539617372749944,0.54907405947211,0.117812402345686,0,0,0,0,1.94970791705028,0,0.136499911407986,2.12108147930569,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,2.53329162357197,9.54955189583715,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0.358042349351218,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.461701551022782,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0,0,0,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0.0882561266915003,0.451961481561065,0,0,0,0,0.0801588202515337,0.640358984218058,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0.558564802544508,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.511164065356265,0.113312091520126,1.46552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,0.149254802886874,0.467426619694449,0,0,0.754703705257725,1.77962244319307,0.686520205190771,0.453692771289717,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,1.24411862352257,0,0,1.50257608997218,1.14241563650639,1.22061219961398,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0.673498977531838,0,0,0.214441591374926,0,0.906823702049089,0,0.244736704506468,0,0,1.09642024789354,0,0,0,0,0.345430341731199,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,3.062454773532,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.752103283492572,0.20170506870352,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0.685952037749674,0,0,0,0,0.313972371402056,0,0,1.82631744101899,0,0.47775168788705,0,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.154348316215889,0.874238242015829,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,0,0.535661815816973,0,0,0,0,0.143339583151451,0,0,0,1.0580536810308,2.97596014533401,7.39481005810269,3.46101249699031,0.126166424835079,0,0,0,0,0,0,0.303114792872958,0,0,0,0.639701945702943,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0.870866991587845,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0.406896178315738,1.33151354837103,0.603821380773079,0 | |||
|short_description=p@chr12:7177634..7177646,+ | |||
}} |
Latest revision as of 12:12, 24 July 2015
Short description: | p@chr12:7177634..7177646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7177634..7177646, + |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.33e-21 | 9 |
carbohydrate secreting cell | 7.33e-21 | 9 |
chondroblast | 4.11e-16 | 6 |
chondrocyte | 4.11e-16 | 6 |
stromal cell | 3.12e-15 | 28 |
fibrocyte | 2.33e-13 | 3 |
tendon cell | 2.33e-13 | 3 |
extracellular matrix secreting cell | 4.07e-12 | 15 |
fat cell | 9.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.33e-13 | 3 |
tendon | 2.33e-13 | 3 |
regular connective tissue | 2.33e-13 | 3 |
cavity lining | 1.95e-08 | 12 |
serous membrane | 1.95e-08 | 12 |