FFCP PHASE1:Hg19::chr12:71054806..71054824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:71054806..71054824,- | |||
|description=CAGE_peak_at_chr12:71054806..71054824,- | |description=CAGE_peak_at_chr12:71054806..71054824,- | ||
|id=chr12:71054806..71054824,- | |id=chr12:71054806..71054824,- | ||
|ontology_enrichment_celltype=CL:0000077!1.25e-09!19 | |ontology_enrichment_celltype=CL:0000077!1.25e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.22e-09;19!CL:0002573;2.06e-08;2!CL:0000511;4.32e-07;1!CL:0002625;4.32e-07;1!CL:0000216;4.32e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.08e-09,19;CL:0002573,1.99e-08,2;CL:0000511,4.33e-07,1;CL:0002625,4.33e-07,1;CL:0000216,4.33e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.72e-10!239;DOID:162!2.25e-08!235 | |ontology_enrichment_disease=DOID:14566!8.72e-10!239;DOID:162!2.25e-08!235 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.37e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.18e-10,8 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.32e-07;1!UBERON:0001343;4.32e-07;1!UBERON:0004910;4.32e-07;1!UBERON:0004813;4.32e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.33e-07,1;UBERON:0001343,4.33e-07,1;UBERON:0004910,4.33e-07,1;UBERON:0005154,4.33e-07,1;UBERON:0005295,4.33e-07,1;UBERON:0004813,4.33e-07,1;UBERON:0005297,4.33e-07,1;UBERON:0005294,4.33e-07,1;UBERON:0010141,4.33e-07,1;UBERON:0005891,4.33e-07,1 | |||
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|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0.258416759169329,1.77883131343355,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,1.98613771219828,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.389748020644795,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0.966304265816484,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.441175890929576,1.08939722046203,0.237270619111097,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0.93733833986777,1.34385702559088,0,0,0,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0.1466765716419,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,2.23297027036899,0.61384789315225,0,0.384417447767103,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.976135183992909,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,3.21367859688319,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0,0.255679882248303,0.267096106940212,0,0,0.127612712494584,0,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0,0,0.632758849437452,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0,0,1.07001315444375,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,2.81974010175699,0.18714054040822,0,0,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,2.11486539543521,0,0,0,0,0,0.306806047506464,0,1.24415835064723,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59518878185802,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,1.1279783030859,1.56850027454192,1.84603745673427,1.13852239634511,0.476809736941136,0,0,0,0,0,0,0,2.96521128680622,1.60633120630454,0.730953646538188,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,1.30588809870604,0,0.687944129886466,0,0,0,0,0.264768380074501,0,2.32971271899477,0.19871461170299,0.0633107959558787,0,0.480952921509202,0,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0,0.815425236441684,0.941425616810999,0,0.288950589901519,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0.542999601753713,0,0.326587360109409,1.19730191562487,0.492555124496034,3.06698439213759,0,0,0,0,0,0.171086837884329,0,0,0.314408610199332,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.06154382279153,0,0,0,0,0,0.233713309847224,0,0,0,0,1.37304041038154,0.453692771289717,0.15543720058278,0.73927574994817,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0.928067519756987,0,2.80019435264208,0,0,0,1.34833881285112,0,0,1.13352962756136,0.694567422971502,0,0.537266523244462,0.308801447160972,0.219284049578707,3.88716121080938,0.964570191354574,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.983091635014877,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0.535701835878287,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,1.51149313853035,0,0,0,0,0,0,0,0,0,0,2.36664001461131,2.89725576181136,0,0,0.62041277132864,0,0.111855431797792,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0,0,0,0.705789743431384,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.4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| ||
|short_description=p@chr12:71054806..71054824,- | |short_description=p@chr12:71054806..71054824,- | ||
}} | }} |
Latest revision as of 12:09, 24 July 2015
Short description: | p@chr12:71054806..71054824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:71054806..71054824, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.08e-09 | 19 |
Schwann cell | 1.99e-08 | 2 |
androgen binding protein secreting cell | 4.33e-07 | 1 |
seminiferous tubule epithelial cell | 4.33e-07 | 1 |
Sertoli cell | 4.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.33e-07 | 1 |
seminiferous tubule of testis | 4.33e-07 | 1 |
epithelium of male gonad | 4.33e-07 | 1 |
epithelial cord | 4.33e-07 | 1 |
sex cord | 4.33e-07 | 1 |
seminiferous tubule epithelium | 4.33e-07 | 1 |
testis sex cord | 4.33e-07 | 1 |
genital ridge | 4.33e-07 | 1 |
primitive sex cord of indifferent gonad | 4.33e-07 | 1 |
coelomic epithelium | 4.33e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.18e-10 | 8 |