FFCP PHASE1:Hg19::chr12:69754055..69754064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:69754055..69754064,+ | |||
|coexpression_cluster_id=C153 | |coexpression_cluster_id=C153 | ||
|description=CAGE_peak_at_chr12:69754055..69754064,+ | |description=CAGE_peak_at_chr12:69754055..69754064,+ | ||
|id=chr12:69754055..69754064,+ | |id=chr12:69754055..69754064,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.04e-09!172;CL:0000566!2.04e-09!172;CL:0002032!6.67e-09!165;CL:0000837!6.67e-09!165;CL:0000988!8.19e-09!182 | |ontology_enrichment_celltype=CL:0000037!2.04e-09!172;CL:0000566!2.04e-09!172;CL:0002032!6.67e-09!165;CL:0000837!6.67e-09!165;CL:0000988!8.19e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000037;1.81e-40;1!CL:0001024;1.81e-40;1!CL:0002253;5.15e-21;2!CL:0000767;1.71e-14;3!CL:0002563;3.26e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,3.30e-40,1;CL:0002253,4.66e-21,2;CL:0000767,1.83e-14,3;CL:0002563,3.10e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.48e-13!235;DOID:14566!6.57e-13!239;DOID:0050686!2.56e-10!137;DOID:0050687!2.40e-09!143;DOID:0060058!5.19e-09!10;DOID:305!7.98e-08!106;DOID:2531!1.96e-07!51;DOID:0060083!1.96e-07!51 | |ontology_enrichment_disease=DOID:162!1.48e-13!235;DOID:14566!6.57e-13!239;DOID:0050686!2.56e-10!137;DOID:0050687!2.40e-09!143;DOID:0060058!5.19e-09!10;DOID:305!7.98e-08!106;DOID:2531!1.96e-07!51;DOID:0060083!1.96e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:5409;3.26e-11;4!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.26e-11;4!UBERON:0001242;3.26e-11;4!UBERON:0001262;3.26e-11;4!UBERON:0004786;3.26e-11;4!UBERON:0004808;3.26e-11;4!UBERON:0001277;3.26e-11;4!UBERON:0004907;3.10e-09;5!UBERON:0000485;5.86e-07;7!UBERON:0003929;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-11,4;UBERON:0001242,3.10e-11,4;UBERON:0001262,3.10e-11,4;UBERON:0004786,3.10e-11,4;UBERON:0004808,3.10e-11,4;UBERON:0001277,3.10e-11,4;UBERON:0004907,2.97e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,1.18009283054671,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,1.17440175733939,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0.502497330513487,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.384273959177026,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0.210998064528027,0.489698424477443,1.27217764290547,0,0,0,0,0,0,0.208843899010911,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0.0870592065804026,0,0.51595809741485,0.290268993867255,0.438535902517113,0.164230914106418,0,0,0,0,0,0,0,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,6.95433089210318,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0.243835849964539,0,0,0,0,0.935757853848423,0.198950775161368,1.42704108933082,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0,0,0.23806443146374,0.129177819672012,0.434523000071005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr12:69754055..69754064,+ | |short_description=p@chr12:69754055..69754064,+ | ||
}} | }} |
Latest revision as of 11:54, 24 July 2015
Short description: | p@chr12:69754055..69754064, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69754055..69754064, + |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 3.30e-40 | 1 |
epithelial cell of large intestine | 4.66e-21 | 2 |
basophil | 1.83e-14 | 3 |
intestinal epithelial cell | 3.10e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-11 | 4 |
intestinal mucosa | 3.10e-11 | 4 |
wall of intestine | 3.10e-11 | 4 |
gastrointestinal system mucosa | 3.10e-11 | 4 |
gastrointestinal system epithelium | 3.10e-11 | 4 |
intestinal epithelium | 3.10e-11 | 4 |
lower digestive tract | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |