FFCP PHASE1:Hg19::chr12:660023..660044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:660023..660044,+ | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr12:660023..660044,+ | |description=CAGE_peak_at_chr12:660023..660044,+ | ||
|id=chr12:660023..660044,+ | |id=chr12:660023..660044,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.20e-08!2 | |ontology_enrichment_celltype=CL:0000242!1.20e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.61e-34;2!CL:0000242;3.61e-34;2!CL:0000312;1.40e-14;5!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000362;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.61e-34,2;CL:0000312,1.40e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000362,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.34e-66;1!CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease=DOID:114!1.44e-29!2;DOID:178!1.54e-15!1;DOID:326!1.54e-15!1;DOID:3978!1.54e-15!1;DOID:3394!1.54e-15!1;DOID:5844!1.54e-15!1;DOID:1287!2.56e-15!4 | |||
|ontology_enrichment_disease_v019=DOID:114;5.96e-34;2!DOID:1287;9.45e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.05e-34,2;DOID:1287,1.03e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!7.70e-19!27;UBERON:0002084!6.44e-16!1;UBERON:0002082!6.44e-16!1;UBERON:0004706!6.44e-16!1;UBERON:0002146!8.63e-16!1;UBERON:0005623!8.63e-16!1;UBERON:0002426!9.99e-16!1;UBERON:0003831!9.99e-16!1;UBERON:0003898!9.99e-16!1;UBERON:0004830!9.99e-16!1;UBERON:0001774!9.99e-16!1;UBERON:0003830!9.99e-16!1;UBERON:0005175!9.99e-16!1;UBERON:0003897!9.99e-16!1;UBERON:0001103!9.99e-16!1;UBERON:0010084!9.99e-16!1;UBERON:0007029!1.34e-15!1;UBERON:0003103!1.17e-09!69;UBERON:0001630!1.61e-08!2;UBERON:0005090!1.61e-08!2;UBERON:0000341!2.48e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;3.34e-66;1!UBERON:0002082;3.34e-66;1!UBERON:0004151;3.66e-23;3!UBERON:0007100;1.15e-11;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,2.39e-66,1;UBERON:0002082,2.39e-66,1;UBERON:0010226,2.39e-66,1;UBERON:0004151,3.27e-23,3;UBERON:0007100,6.90e-11,27 | |||
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|short_description=p@chr12:660023..660044,+ | |short_description=p@chr12:660023..660044,+ | ||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p@chr12:660023..660044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:660023..660044, + |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.61e-34 | 2 |
keratinocyte | 1.40e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 2.39e-66 | 1 |
cardiac ventricle | 2.39e-66 | 1 |
future cardiac ventricle | 2.39e-66 | 1 |
cardiac chamber | 3.27e-23 | 3 |
primary circulatory organ | 6.90e-11 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.05e-34 | 2 |
cardiovascular system disease | 1.03e-17 | 4 |