FFCP PHASE1:Hg19::chr12:65090856..65090873,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:65090856..65090873,+ to FFCP PHASE1:Hg19::chr12:65090856..65090873,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:65090856..65090873,+ | |||
|coexpression_cluster_id=C500 | |||
|description=CAGE_peak_at_chr12:65090856..65090873,+ | |||
|id=chr12:65090856..65090873,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.76e-35!119;CL:0000738!1.59e-32!140;CL:0002031!2.85e-27!124;CL:0002032!4.07e-24!165;CL:0000837!4.07e-24!165;CL:0000988!1.18e-23!182;CL:0000037!1.49e-23!172;CL:0000566!1.49e-23!172;CL:0002057!7.35e-23!42;CL:0002194!4.26e-22!63;CL:0000576!4.26e-22!63;CL:0000040!4.26e-22!63;CL:0000559!4.26e-22!63;CL:0000860!2.10e-21!45;CL:0002009!2.45e-21!65;CL:0000766!7.96e-21!76;CL:0000557!5.41e-16!71;CL:0000839!1.08e-15!70;CL:0000542!2.49e-12!53;CL:0000051!2.49e-12!53;CL:0000763!3.39e-12!112;CL:0000049!3.39e-12!112;CL:0000838!4.57e-12!52;CL:0000134!1.36e-08!358;CL:0000791!2.64e-08!18;CL:0000789!2.64e-08!18;CL:0002420!2.64e-08!18;CL:0002419!2.64e-08!18;CL:0000790!2.64e-08!18;CL:0000219!4.60e-08!390;CL:0002320!2.27e-07!365;CL:0000084!2.68e-07!25;CL:0000827!2.68e-07!25;CL:0000048!2.93e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-17;33!CL:0002057;2.78e-17;33!CL:0000473;9.44e-17;39!CL:0000234;9.44e-17;39!CL:0000576;1.21e-13;48!CL:0002087;1.30e-10;104!CL:0000766;6.18e-10;69!CL:0000791;2.35e-08;18!CL:0000789;2.35e-08;18!CL:0002419;2.35e-08;18!CL:0000738;4.18e-08;136!CL:0000542;5.42e-08;53!CL:0000084;2.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.75e-36,115;CL:0000738,4.35e-33,136;CL:0002031,8.65e-28,120;CL:0000473,1.73e-25,48;CL:0000234,1.73e-25,48;CL:0002032,2.10e-24,161;CL:0000837,2.10e-24,161;CL:0000037,8.23e-24,168;CL:0000988,1.64e-23,177;CL:0002194,4.04e-23,59;CL:0000576,4.04e-23,59;CL:0000040,4.04e-23,59;CL:0000559,4.04e-23,59;CL:0000860,7.32e-23,42;CL:0002057,7.32e-23,42;CL:0002009,2.80e-22,61;CL:0000766,1.36e-21,72;CL:0000557,1.28e-16,67;CL:0000839,2.87e-16,66;CL:0000763,2.06e-12,108;CL:0000049,2.06e-12,108;CL:0000542,2.48e-12,53;CL:0000051,2.48e-12,53;CL:0000838,4.56e-12,52;CL:0000134,1.82e-08,354;CL:0000791,2.64e-08,18;CL:0000789,2.64e-08,18;CL:0002420,2.64e-08,18;CL:0002419,2.64e-08,18;CL:0000790,2.64e-08,18;CL:0000219,6.18e-08,386;CL:0000084,2.68e-07,25;CL:0000827,2.68e-07,25;CL:0002320,2.99e-07,361;CL:0000048,4.96e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;8.84e-17;42!CL:0000790;2.35e-08;18!CL:0000051;5.42e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-16!102;UBERON:0003061!1.71e-16!102;UBERON:0002193!1.17e-15!112;UBERON:0002371!3.99e-12!80;UBERON:0001474!6.29e-11!86;UBERON:0003081!1.76e-10!216;UBERON:0000178!7.37e-08!15;UBERON:0000179!7.37e-08!15;UBERON:0000463!7.37e-08!15;UBERON:0002405!1.77e-07!115;UBERON:0004765!4.24e-07!101;UBERON:0001434!4.24e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.04e-08;15!UBERON:0000179;7.04e-08;15!UBERON:0000463;7.04e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.54e-17,98;UBERON:0003061,6.54e-17,98;UBERON:0002193,5.13e-16,108;UBERON:0002371,1.62e-12,76;UBERON:0003081,2.96e-11,203;UBERON:0001474,3.08e-11,82;UBERON:0002405,1.03e-10,93;UBERON:0000926,2.46e-09,315;UBERON:0004120,2.46e-09,315;UBERON:0006603,2.46e-09,315;UBERON:0004765,5.08e-08,90;UBERON:0000178,7.36e-08,15;UBERON:0000179,7.36e-08,15;UBERON:0000463,7.36e-08,15 | |||
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| ||
|short_description=p@chr12:65090856..65090873,+ | |||
}} | }} |
Latest revision as of 11:20, 24 July 2015
Short description: | p@chr12:65090856..65090873, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65090856..65090873, + |
Coexpression cluster: | C500_Neutrophils_Monocytederived_blood_CD14_Eosinophils_lung_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.54e-17 | 98 |
blood island | 6.54e-17 | 98 |
hemolymphoid system | 5.13e-16 | 108 |
bone marrow | 1.62e-12 | 76 |
lateral plate mesoderm | 2.96e-11 | 203 |
bone element | 3.08e-11 | 82 |
immune system | 1.03e-10 | 93 |
mesoderm | 2.46e-09 | 315 |
mesoderm-derived structure | 2.46e-09 | 315 |
presumptive mesoderm | 2.46e-09 | 315 |
skeletal element | 5.08e-08 | 90 |
blood | 7.36e-08 | 15 |
haemolymphatic fluid | 7.36e-08 | 15 |
organism substance | 7.36e-08 | 15 |