FFCP PHASE1:Hg19::chr12:64539349..64539352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:64539349..64539352,+ | |||
|description=CAGE_peak_at_chr12:64539349..64539352,+ | |description=CAGE_peak_at_chr12:64539349..64539352,+ | ||
|id=chr12:64539349..64539352,+ | |id=chr12:64539349..64539352,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.97e-08!254;CL:0000055!9.33e-07!180 | |ontology_enrichment_celltype=CL:0000066!6.97e-08!254;CL:0000055!9.33e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.31e-09;3!CL:0000214;2.52e-09;3!CL:0002616;4.70e-08;1!CL:0000511;1.30e-07;1!CL:0002625;1.30e-07;1!CL:0002574;1.30e-07;1!CL:0000216;1.30e-07;1!CL:0000313;1.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.13e-09,3;CL:0000214,2.05e-09,3;CL:0002616,4.57e-08,1;CL:0000511,6.37e-08,1;CL:0002625,6.37e-08,1;CL:0000216,6.37e-08,1;CL:0000313,1.91e-07,1;CL:0002574,2.63e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.30e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.70e-08!143;DOID:120!7.96e-08!27;DOID:193!1.25e-07!29;DOID:305!2.23e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.70e-08!143;DOID:120!7.96e-08!27;DOID:193!1.25e-07!29;DOID:305!2.23e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:2152;1.30e-07;1!DOID:6193;1.30e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.91e-07,1;DOID:6193,2.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.00e-07!59;UBERON:0000990!1.00e-07!59;UBERON:0003100!2.75e-07!41;UBERON:0000468!3.94e-07!659 | |ontology_enrichment_uberon=UBERON:0005156!1.00e-07!59;UBERON:0000990!1.00e-07!59;UBERON:0003100!2.75e-07!41;UBERON:0000468!3.94e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0004909;1.52e-13;2!UBERON:0004457;1.53e-11;9!UBERON:0000042;1.53e-11;9!UBERON:0006915;2.52e-09;3!UBERON:0007616;2.52e-09;3!UBERON:0002217;2.52e-09;3!UBERON:0002018;2.52e-09;3!UBERON:0001831;1.30e-07;1!UBERON:0001136;1.30e-07;1!UBERON:0001343;1.30e-07;1!UBERON:0004911;1.30e-07;1!UBERON:0004910;1.30e-07;1!UBERON:0004813;1.30e-07;1!UBERON:0001567;1.30e-07;1!UBERON:0004905;1.33e-07;8!UBERON:0000982;1.33e-07;8!UBERON:0004770;1.33e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,1.12e-13,2;UBERON:0006915,2.05e-09,3;UBERON:0007616,2.05e-09,3;UBERON:0002217,2.05e-09,3;UBERON:0002018,2.05e-09,3;UBERON:0004457,9.32e-09,12;UBERON:0000042,9.32e-09,12;UBERON:0001136,6.37e-08,1;UBERON:0001343,6.37e-08,1;UBERON:0004910,6.37e-08,1;UBERON:0005154,6.37e-08,1;UBERON:0005295,6.37e-08,1;UBERON:0004813,6.37e-08,1;UBERON:0005297,6.37e-08,1;UBERON:0005294,6.37e-08,1;UBERON:0010141,6.37e-08,1;UBERON:0005891,6.37e-08,1;UBERON:0004905,1.43e-07,8;UBERON:0000982,1.43e-07,8;UBERON:0004770,1.43e-07,8;UBERON:0004911,1.91e-07,1;UBERON:0001831,2.04e-07,1;UBERON:0001567,2.04e-07,1;UBERON:0008801,2.04e-07,1;UBERON:0004458,4.01e-07,49 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,2.00146596706261,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,0,0.50133791063589,0.724232594804119,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0.448346041655403,0.469737994575059,0.485618833104395,0.421352420106746,0.816616685019573,0.245668634623536,0.413303124703062,1.18800285728205,0.247266929278557,0,1.43723628363248,0.336672227908132,0,0.277064115484183,0,0.612975591598039,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.515262646192195,0,0.18611685633159,0.337552664482532,0.194874010322397,0.504867548488229,0.920498986422993,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.402115889646523,0.277765335475589,0.651616610620649,0,1.44331342025273,0.231860809950154,0,0,0,0.190254152234598,1.58040879591855,0,0,0,0,0,0.16798212819886,0,0.447792613514241,1.16253575405585,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.613457458595699,0,1.08506009479894,0,0.713715955188647,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0,1.66435439510497,0,0.744323423456331,0.153461973288062,0.841980283299221,0.896974044789907,0,0,0,0.462629081407967,0.177561725313127,0.328508624055237,0,1.51073491997947,0,0.200506470303285,0.276242966807689,0.114814448164607,0.728364672026868,0.524497659837696,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.509752546090077,0,0.895499018888713,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,1.6068392984416,0.48335359146061,0.770243085573222,0.460511024178389,0.964856007391714,0.107420244868274,0.435050081742686,0.170453254832202,0.267096106940212,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0,0.143124886741991,0.372158369359667,0,0.38126038784765,0.767693373934002,0,0.318203247925937,0.78494864019923,0.539617372749944,0.54907405947211,0.235624804691373,0,0,0,0,0.974853958525138,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0.655894752046633,0,0,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.709522128141196,1.05553817648832,1.97576935775941,0,0.349934720244983,0.288666338176536,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.445234820091624,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0.179736702294654,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.10893846351899,0.278847488557207,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0.391329237864179,0.728341138602278,0.394584402849391,0,0.91821828489147,0,0,0.103688191397247,0,0.661983911750998,0.313932918407225,0,0.569219092059585,0.416024019039416,0.347119476670262,0.0979923974143777,0.261177619741208,0,1.0319161948297,0.19351266257817,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0.586654148204409,0,0,0.599428828746391,0.144090417154106,0,0.857974989309823,0.14405479798815,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0.236349546921671,0.0824158583811665,0,0.78741985211799,0,0,0.408610218334727,0,0.2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| ||
|short_description=p@chr12:64539349..64539352,+ | |short_description=p@chr12:64539349..64539352,+ | ||
}} | }} |
Latest revision as of 11:15, 24 July 2015
Short description: | p@chr12:64539349..64539352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:64539349..64539352, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.13e-09 | 3 |
synovial cell | 2.05e-09 | 3 |
perirenal adipocyte cell | 4.57e-08 | 1 |
androgen binding protein secreting cell | 6.37e-08 | 1 |
seminiferous tubule epithelial cell | 6.37e-08 | 1 |
Sertoli cell | 6.37e-08 | 1 |
serous secreting cell | 1.91e-07 | 1 |
stromal cell of pancreas | 2.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 1.12e-13 | 2 |
stratified squamous epithelium | 2.05e-09 | 3 |
layer of synovial tissue | 2.05e-09 | 3 |
synovial joint | 2.05e-09 | 3 |
synovial membrane of synovial joint | 2.05e-09 | 3 |
cavity lining | 9.32e-09 | 12 |
serous membrane | 9.32e-09 | 12 |
mesothelium | 6.37e-08 | 1 |
seminiferous tubule of testis | 6.37e-08 | 1 |
epithelium of male gonad | 6.37e-08 | 1 |
epithelial cord | 6.37e-08 | 1 |
sex cord | 6.37e-08 | 1 |
seminiferous tubule epithelium | 6.37e-08 | 1 |
testis sex cord | 6.37e-08 | 1 |
genital ridge | 6.37e-08 | 1 |
primitive sex cord of indifferent gonad | 6.37e-08 | 1 |
coelomic epithelium | 6.37e-08 | 1 |
articulation | 1.43e-07 | 8 |
skeletal joint | 1.43e-07 | 8 |
articular system | 1.43e-07 | 8 |
epithelium of female gonad | 1.91e-07 | 1 |
parotid gland | 2.04e-07 | 1 |
cheek | 2.04e-07 | 1 |
parotid gland primordium | 2.04e-07 | 1 |
body cavity or lining | 4.01e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.91e-07 | 1 |
epithelioid sarcoma | 2.80e-07 | 1 |