FFCP PHASE1:Hg19::chr12:62729684..62729697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:62729684..62729697,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_at_chr12:62729684..62729697,+ | |description=CAGE_peak_at_chr12:62729684..62729697,+ | ||
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|ontology_enrichment_celltype=CL:0000037!6.33e-17!172;CL:0000566!6.33e-17!172;CL:0000988!3.73e-16!182;CL:0002032!1.16e-15!165;CL:0000837!1.16e-15!165;CL:0000738!3.56e-15!140;CL:0002087!6.86e-15!119;CL:0002031!3.64e-13!124;CL:0002057!1.54e-12!42;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0000860!4.92e-11!45;CL:0002009!4.83e-10!65;CL:0000766!5.41e-10!76;CL:0002194!6.32e-10!63;CL:0000576!6.32e-10!63;CL:0000040!6.32e-10!63;CL:0000559!6.32e-10!63;CL:0000839!3.94e-09!70;CL:0000557!7.49e-09!71;CL:0000134!6.10e-08!358;CL:0002320!1.63e-07!365 | |ontology_enrichment_celltype=CL:0000037!6.33e-17!172;CL:0000566!6.33e-17!172;CL:0000988!3.73e-16!182;CL:0002032!1.16e-15!165;CL:0000837!1.16e-15!165;CL:0000738!3.56e-15!140;CL:0002087!6.86e-15!119;CL:0002031!3.64e-13!124;CL:0002057!1.54e-12!42;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0000860!4.92e-11!45;CL:0002009!4.83e-10!65;CL:0000766!5.41e-10!76;CL:0002194!6.32e-10!63;CL:0000576!6.32e-10!63;CL:0000040!6.32e-10!63;CL:0000559!6.32e-10!63;CL:0000839!3.94e-09!70;CL:0000557!7.49e-09!71;CL:0000134!6.10e-08!358;CL:0002320!1.63e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000775;3.47e-33;3!CL:0000094;7.59e-13;8!CL:0000511;8.62e-12;1!CL:0002625;8.62e-12;1!CL:0000228;8.62e-12;1!CL:0000216;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0000473;2.44e-10;39!CL:0000234;2.44e-10;39!CL:0000081;1.73e-09;11!CL:0000860;1.98e-09;33!CL:0002057;1.98e-09;33!CL:0000576;7.33e-07;48 | |ontology_enrichment_celltype_v019=CL:0000775;3.47e-33;3!CL:0000094;7.59e-13;8!CL:0000511;8.62e-12;1!CL:0002625;8.62e-12;1!CL:0000228;8.62e-12;1!CL:0000216;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0000473;2.44e-10;39!CL:0000234;2.44e-10;39!CL:0000081;1.73e-09;11!CL:0000860;1.98e-09;33!CL:0002057;1.98e-09;33!CL:0000576;7.33e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.49e-33,3;CL:0000766,6.12e-16,72;CL:0000473,4.78e-13,48;CL:0000234,4.78e-13,48;CL:0000094,7.60e-13,8;CL:0000763,3.54e-12,108;CL:0000049,3.54e-12,108;CL:0000511,4.53e-12,1;CL:0002625,4.53e-12,1;CL:0000216,4.53e-12,1;CL:0000228,6.26e-12,1;CL:0002372,6.26e-12,1;CL:0000860,1.37e-11,42;CL:0002057,1.37e-11,42;CL:0000738,4.66e-11,136;CL:0002032,1.20e-10,161;CL:0000837,1.20e-10,161;CL:0002194,2.96e-10,59;CL:0000576,2.96e-10,59;CL:0000040,2.96e-10,59;CL:0000559,2.96e-10,59;CL:0000037,4.05e-10,168;CL:0002009,6.80e-10,61;CL:0000988,1.69e-09,177;CL:0000081,1.74e-09,11;CL:0000839,4.37e-09,66;CL:0000557,6.14e-09,67;CL:0002087,1.30e-07,115;CL:0002031,3.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.25e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.87e-12!102;UBERON:0003061!1.87e-12!102;UBERON:0002193!1.19e-10!112;UBERON:0000178!7.11e-08!15;UBERON:0000179!7.11e-08!15;UBERON:0000463!7.11e-08!15;UBERON:0002384!1.24e-07!375;UBERON:0002371!2.91e-07!80;UBERON:0001474!5.90e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!1.87e-12!102;UBERON:0003061!1.87e-12!102;UBERON:0002193!1.19e-10!112;UBERON:0000178!7.11e-08!15;UBERON:0000179!7.11e-08!15;UBERON:0000463!7.11e-08!15;UBERON:0002384!1.24e-07!375;UBERON:0002371!2.91e-07!80;UBERON:0001474!5.90e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.62e-12;1!UBERON:0001343;8.62e-12;1!UBERON:0004910;8.62e-12;1!UBERON:0004813;8.62e-12;1 | |ontology_enrichment_uberon_v019=UBERON:0001136;8.62e-12;1!UBERON:0001343;8.62e-12;1!UBERON:0004910;8.62e-12;1!UBERON:0004813;8.62e-12;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.53e-12,1;UBERON:0001343,4.53e-12,1;UBERON:0004910,4.53e-12,1;UBERON:0005154,4.53e-12,1;UBERON:0005295,4.53e-12,1;UBERON:0004813,4.53e-12,1;UBERON:0005297,4.53e-12,1;UBERON:0005294,4.53e-12,1;UBERON:0010141,4.53e-12,1;UBERON:0005891,4.53e-12,1;UBERON:0002390,3.67e-09,98;UBERON:0003061,3.67e-09,98;UBERON:0002193,3.42e-08,108;UBERON:0002371,8.77e-08,76;UBERON:0001474,3.75e-07,82 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,1.60435557976113,0.651032612147555,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,0,1.1507695692886,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0.674170453335254,0.306083892370903,0.320929027076094,1.91801137739712,0.329851300186716,0.398927315243264,0.426224750532694,1.16083695451434,0,0,2.00998932205395,1.5644487552606,0.65156653411535,1.21079900526674,0,0.632924774881769,0.422510572623884,0,0,0.336985893439485,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.786021525498329,1.02800749499755,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.664601683750863,0.270803863765016,0,0.780356085359269,0.164437904603676,0,0.289803085735052,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,1.33720097891754,0.434473211648397,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,1.42636905040718,0,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,0.646882724578552,0.641715181398742,0,0,0.773288812777695,0,0,26.9642528620986,41.8826042885635,4.14415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0,0.411362273086194,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0,0.423347165447766,0,0.842391534340376,0,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0.326465616318295,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0.247871528518004,0,0,0.157723490002507,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0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| ||
|short_description=p@chr12:62729684..62729697,+ | |short_description=p@chr12:62729684..62729697,+ | ||
}} | }} |
Latest revision as of 11:08, 24 July 2015
Short description: | p@chr12:62729684..62729697, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:62729684..62729697, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.49e-33 | 3 |
myeloid leukocyte | 6.12e-16 | 72 |
defensive cell | 4.78e-13 | 48 |
phagocyte | 4.78e-13 | 48 |
granulocyte | 7.60e-13 | 8 |
myeloid cell | 3.54e-12 | 108 |
common myeloid progenitor | 3.54e-12 | 108 |
androgen binding protein secreting cell | 4.53e-12 | 1 |
seminiferous tubule epithelial cell | 4.53e-12 | 1 |
Sertoli cell | 4.53e-12 | 1 |
multinucleate cell | 6.26e-12 | 1 |
myotube | 6.26e-12 | 1 |
classical monocyte | 1.37e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-11 | 42 |
leukocyte | 4.66e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.20e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-10 | 161 |
monopoietic cell | 2.96e-10 | 59 |
monocyte | 2.96e-10 | 59 |
monoblast | 2.96e-10 | 59 |
promonocyte | 2.96e-10 | 59 |
hematopoietic stem cell | 4.05e-10 | 168 |
macrophage dendritic cell progenitor | 6.80e-10 | 61 |
hematopoietic cell | 1.69e-09 | 177 |
blood cell | 1.74e-09 | 11 |
myeloid lineage restricted progenitor cell | 4.37e-09 | 66 |
granulocyte monocyte progenitor cell | 6.14e-09 | 67 |
nongranular leukocyte | 1.30e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.53e-12 | 1 |
seminiferous tubule of testis | 4.53e-12 | 1 |
epithelium of male gonad | 4.53e-12 | 1 |
epithelial cord | 4.53e-12 | 1 |
sex cord | 4.53e-12 | 1 |
seminiferous tubule epithelium | 4.53e-12 | 1 |
testis sex cord | 4.53e-12 | 1 |
genital ridge | 4.53e-12 | 1 |
primitive sex cord of indifferent gonad | 4.53e-12 | 1 |
coelomic epithelium | 4.53e-12 | 1 |
hematopoietic system | 3.67e-09 | 98 |
blood island | 3.67e-09 | 98 |
hemolymphoid system | 3.42e-08 | 108 |
bone marrow | 8.77e-08 | 76 |
bone element | 3.75e-07 | 82 |