FFCP PHASE1:Hg19::chr12:620222..620224,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:620222..620224,+
|short_description=p@chr12:620222..620224,+
|description=CAGE_peak_at_chr12:620222..620224,+
|association_with_transcript=NA
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:620222..620224,+ | |||
|description=CAGE_peak_at_chr12:620222..620224,+ | |||
|id=chr12:620222..620224,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;8.34e-18;2!CL:0000242;8.34e-18;2!CL:0000312;6.33e-08;5!CL:0000240;8.25e-07;6!CL:0000311;8.25e-07;6!CL:0000079;8.25e-07;6!CL:0000237;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.48e-18,2;CL:0000312,5.35e-08,5;CL:0000240,7.17e-07,6;CL:0000311,7.17e-07,6;CL:0000079,7.17e-07,6;CL:0000237,7.17e-07,6;CL:0000036,7.17e-07,6;CL:0000357,7.17e-07,6;CL:0000114,7.17e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.27e-34;1!UBERON:0004872;7.84e-20;7!UBERON:0006965;8.34e-18;2!CL:0000357;8.25e-07;6!CL:0000114;8.25e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.83e-66;2!DOID:178;4.27e-34;1!DOID:326;4.27e-34;1!DOID:3978;4.27e-34;1!DOID:3394;4.27e-34;1!DOID:5844;4.27e-34;1!DOID:1287;8.35e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.96e-66,2;DOID:178,7.06e-34,1;DOID:326,7.06e-34,1;DOID:3978,7.06e-34,1;DOID:3394,7.06e-34,1;DOID:5844,7.06e-34,1;DOID:1287,9.88e-34,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-15!115;UBERON:0002780!3.89e-15!41;UBERON:0001890!3.89e-15!41;UBERON:0006240!3.89e-15!41;UBERON:0003080!1.15e-14!42;UBERON:0001869!8.00e-14!32;UBERON:0001950!1.56e-13!20;UBERON:0001893!8.47e-13!34;UBERON:0002619!4.19e-12!22;UBERON:0002791!1.42e-11!33;UBERON:0002020!3.90e-11!34;UBERON:0003528!3.90e-11!34;UBERON:0003056!4.50e-11!61;UBERON:0001049!7.54e-11!57;UBERON:0005068!7.54e-11!57;UBERON:0006241!7.54e-11!57;UBERON:0007135!7.54e-11!57;UBERON:0000956!2.23e-10!25;UBERON:0000203!2.23e-10!25;UBERON:0002616!2.57e-10!59;UBERON:0000955!4.85e-10!69;UBERON:0006238!4.85e-10!69;UBERON:0005743!7.20e-09!86;UBERON:0001017!1.27e-08!82;UBERON:0002346!1.90e-08!90;UBERON:0000073!2.53e-08!94;UBERON:0001016!2.53e-08!94;UBERON:0003075!3.83e-08!86;UBERON:0007284!3.83e-08!86;UBERON:0001871!1.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.20e-12;25!UBERON:0003103;1.35e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.94e-12,27;UBERON:0003103,2.48e-08,68 | |||
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| ||
|short_description=p@chr12:620222..620224,+ | |||
}} | }} |
Latest revision as of 11:04, 24 July 2015
Short description: | p@chr12:620222..620224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:620222..620224, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.48e-18 | 2 |
keratinocyte | 5.35e-08 | 5 |
stratified squamous epithelial cell | 7.17e-07 | 6 |
keratin accumulating cell | 7.17e-07 | 6 |
stratified epithelial cell | 7.17e-07 | 6 |
keratinizing barrier epithelial cell | 7.17e-07 | 6 |
epithelial fate stem cell | 7.17e-07 | 6 |
stratified epithelial stem cell | 7.17e-07 | 6 |
surface ectodermal cell | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 8.94e-12 | 27 |
compound organ | 2.48e-08 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.96e-66 | 2 |
vascular disease | 7.06e-34 | 1 |
ischemia | 7.06e-34 | 1 |
extrinsic cardiomyopathy | 7.06e-34 | 1 |
myocardial ischemia | 7.06e-34 | 1 |
myocardial infarction | 7.06e-34 | 1 |
cardiovascular system disease | 9.88e-34 | 4 |