FFCP PHASE1:Hg19::chr12:58329689..58329704,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:58329689..58329704,- to FFCP PHASE1:Hg19::chr12:58329689..58329704,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=137bp_to_ENST00000547492_5end | |||
|cluster_id=chr12:58329689..58329704,- | |||
|coexpression_cluster_id=C2227 | |||
|description=CAGE_peak_4_at_ENST00000547492_5end | |||
|id=chr12:58329689..58329704,- | |||
|ontology_enrichment_celltype=CL:0000988!4.62e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000763;1.06e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.28e-14,177;CL:0000037,1.05e-13,168;CL:0000763,2.85e-13,108;CL:0000049,2.85e-13,108;CL:0002032,6.61e-12,161;CL:0000837,6.61e-12,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.32e-32!51;DOID:0060083!7.32e-32!51;DOID:1240!5.37e-28!39;DOID:8692!8.64e-22!31;DOID:1036!1.04e-08!8;DOID:0050686!1.61e-08!137;DOID:14566!3.26e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.73e-55;31!DOID:1240;1.60e-48;39!DOID:2531;9.04e-35;51!DOID:0060083;9.04e-35;51!DOID:1036;4.15e-21;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,7.28e-67,39;DOID:8692,2.49e-58,31;DOID:2531,1.62e-54,51;DOID:0060083,1.62e-54,51;DOID:1036,4.17e-21,8;DOID:0050686,1.05e-19,137;DOID:162,5.31e-12,235;DOID:14566,1.29e-11,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.72e-11;2!UBERON:0005058;7.72e-11;2!UBERON:0009113;7.72e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.58e-11,4;UBERON:0005058,1.58e-11,4;UBERON:0009113,1.58e-11,4;UBERON:0003295,1.58e-11,4;UBERON:0005562,1.58e-11,4;UBERON:0003351,7.84e-08,6;UBERON:0004177,9.05e-07,7;UBERON:0005057,9.05e-07,7 | |||
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| ||
|short_description=p4@ENST00000547492 | |||
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Latest revision as of 10:59, 24 July 2015
Short description: | p4@ENST00000547492 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000547492_5end |
Coexpression cluster: | C2227_chronic_Hodgkin_CD34_CD133_acute_thymus_liposarcoma |
Association with transcript: | 137bp_to_ENST00000547492_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.28e-14 | 177 |
hematopoietic stem cell | 1.05e-13 | 168 |
myeloid cell | 2.85e-13 | 108 |
common myeloid progenitor | 2.85e-13 | 108 |
hematopoietic oligopotent progenitor cell | 6.61e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.58e-11 | 4 |
hemolymphoid system gland | 1.58e-11 | 4 |
thymic region | 1.58e-11 | 4 |
pharyngeal gland | 1.58e-11 | 4 |
thymus primordium | 1.58e-11 | 4 |
pharyngeal epithelium | 7.84e-08 | 6 |
hemopoietic organ | 9.05e-07 | 7 |
immune organ | 9.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 7.28e-67 | 39 |
myeloid leukemia | 2.49e-58 | 31 |
hematologic cancer | 1.62e-54 | 51 |
immune system cancer | 1.62e-54 | 51 |
chronic leukemia | 4.17e-21 | 8 |
organ system cancer | 1.05e-19 | 137 |
cancer | 5.31e-12 | 235 |
disease of cellular proliferation | 1.29e-11 | 239 |