FFCP PHASE1:Hg19::chr12:57630410..57630437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57630410..57630437,- | |||
|coexpression_cluster_id=C243 | |coexpression_cluster_id=C243 | ||
|description=CAGE_peak_at_chr12:57630410..57630437,- | |description=CAGE_peak_at_chr12:57630410..57630437,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000153!1.65e-07!9;CL:0000447!1.65e-07!9 | |ontology_enrichment_celltype=CL:0000153!1.65e-07!9;CL:0000447!1.65e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.06e-12;9!CL:0000447;1.06e-12;9!CL:0000327;1.50e-09;15!CL:0000138;4.77e-09;6!CL:0002596;6.69e-07;2!CL:0002594;8.86e-07;4 | |ontology_enrichment_celltype_v019=CL:0000153;1.06e-12;9!CL:0000447;1.06e-12;9!CL:0000327;1.50e-09;15!CL:0000138;4.77e-09;6!CL:0002596;6.69e-07;2!CL:0002594;8.86e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.07e-12,9;CL:0000447,1.07e-12,9;CL:0000327,1.18e-09,15;CL:0000058,4.82e-09,6;CL:0000138,4.82e-09,6;CL:0002596,3.44e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;6.69e-07;2 | |ontology_enrichment_disease_v019=DOID:114;6.69e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,7.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.33e-17!115;UBERON:0000477!1.68e-07!286 | |ontology_enrichment_uberon=UBERON:0007023!5.33e-17!115;UBERON:0000477!1.68e-07!286 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.64e-09;25!UBERON:0000948;5.17e-07;22!UBERON:0002081;5.95e-07;2!UBERON:0005396;6.69e-07;2!UBERON:0001310;8.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.64e-09;25!UBERON:0000948;5.17e-07;22!UBERON:0002081;5.95e-07;2!UBERON:0005396;6.69e-07;2!UBERON:0001310;8.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.86e-08,27;UBERON:0005396,3.44e-07,2;UBERON:0003103,4.88e-07,68;UBERON:0002081,4.94e-07,2;UBERON:0010227,4.94e-07,2;UBERON:0005406,9.17e-07,2 | |||
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| ||
|short_description=p@chr12:57630410..57630437,- | |short_description=p@chr12:57630410..57630437,- | ||
}} | }} |
Latest revision as of 10:41, 24 July 2015
Short description: | p@chr12:57630410..57630437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57630410..57630437, - |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.07e-12 | 9 |
carbohydrate secreting cell | 1.07e-12 | 9 |
extracellular matrix secreting cell | 1.18e-09 | 15 |
chondroblast | 4.82e-09 | 6 |
chondrocyte | 4.82e-09 | 6 |
smooth muscle cell of the carotid artery | 3.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.86e-08 | 27 |
carotid artery segment | 3.44e-07 | 2 |
compound organ | 4.88e-07 | 68 |
cardiac atrium | 4.94e-07 | 2 |
future cardiac atrium | 4.94e-07 | 2 |
perirenal fat | 9.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.69e-07 | 2 |